RNA–Protein interactions for RNA: ENST00000566553.1

LINC02011-201, Transcript of long intergenic non-protein coding RNA 2011, humanhuman

TSL 2 BASIC

Gene LINC02011, Length 3,830 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02011-201ENST00000566553 NISCHQ9Y2I1 1504 aa20.06■□□□□ 0.8
LINC02011-201ENST00000566553 DCAF8L2P0C7V8 631 aa18.3■□□□□ 0.52
LINC02011-201ENST00000566553 ABCC9O60706 1549 aa17.77■□□□□ 0.44
LINC02011-201ENST00000566553 CCDC180Q9P1Z9 1646 aa17.32■□□□□ 0.36
LINC02011-201ENST00000566553 PABPN1Q86U42 306 aaKnown RBP eCLIP16.99■□□□□ 0.31
LINC02011-201ENST00000566553 SHROOM4Q9ULL8 1493 aa16.98■□□□□ 0.31
LINC02011-201ENST00000566553 RB1CC1Q8TDY2 1594 aa16.7■□□□□ 0.26
LINC02011-201ENST00000566553 ZCCHC6Q5VYS8 1495 aaKnown RBP16.59■□□□□ 0.25
LINC02011-201ENST00000566553 NACADO15069 1562 aa16.59■□□□□ 0.25
LINC02011-201ENST00000566553 SCRIBQ14160 1630 aa16.44■□□□□ 0.22
LINC02011-201ENST00000566553 SUPT5HO00267 1087 aaKnown RBP16.34■□□□□ 0.21
LINC02011-201ENST00000566553 DCAF1Q9Y4B6 1507 aa16.23■□□□□ 0.19
LINC02011-201ENST00000566553 MYO15BQ96JP2 1530 aa16.18■□□□□ 0.18
LINC02011-201ENST00000566553 DNAJC5BQ9UF47 199 aa16.08■□□□□ 0.16
LINC02011-201ENST00000566553 CECR2Q9BXF3 1484 aa15.82■□□□□ 0.12
LINC02011-201ENST00000566553 BICRAQ9NZM4 1560 aa15.81■□□□□ 0.12
LINC02011-201ENST00000566553 UNC13AQ9UPW8 1703 aa15.73■□□□□ 0.11
LINC02011-201ENST00000566553 EIF4G1Q04637 1599 aaKnown RBP15.69■□□□□ 0.1
LINC02011-201ENST00000566553 BAZ1BQ9UIG0 1483 aaKnown RBP15.62■□□□□ 0.09
LINC02011-201ENST00000566553 CC2D2AQ9P2K1 1620 aa15.61■□□□□ 0.09
LINC02011-201ENST00000566553 BAZ1AQ9NRL2 1556 aaPredicted RBP15.6■□□□□ 0.09
LINC02011-201ENST00000566553 MROH2BQ7Z745 1585 aa15.53■□□□□ 0.08
LINC02011-201ENST00000566553 RSF1Q96T23 1441 aaPredicted RBP15.51■□□□□ 0.07
LINC02011-201ENST00000566553 ERCC6Q03468 1493 aa15.51■□□□□ 0.07
LINC02011-201ENST00000566553 ATAD2BQ9ULI0 1458 aa15.51■□□□□ 0.07
LINC02011-201ENST00000566553 SMARCA2P51531 1590 aa15.48■□□□□ 0.07
LINC02011-201ENST00000566553 SMARCA4P51532 1647 aa15.43■□□□□ 0.06
LINC02011-201ENST00000566553 NCAPD3P42695 1498 aa15.39■□□□□ 0.05
LINC02011-201ENST00000566553 EHMT2Q96KQ7 1210 aa15.33■□□□□ 0.05
LINC02011-201ENST00000566553 WIZO95785 1651 aa15.31■□□□□ 0.04
LINC02011-201ENST00000566553 FBLN2P98095 1184 aa15.31■□□□□ 0.04
LINC02011-201ENST00000566553 TRIM41Q8WV44 630 aa15.27■□□□□ 0.03
LINC02011-201ENST00000566553 FAM9AQ8IZU1 332 aaPredicted RBP15.26■□□□□ 0.03
LINC02011-201ENST00000566553 PDS5BQ9NTI5 1447 aa15.26■□□□□ 0.03
LINC02011-201ENST00000566553 CADPSQ9ULU8 1353 aa15.25■□□□□ 0.03
LINC02011-201ENST00000566553 NESP48681 1621 aa15.21■□□□□ 0.03
LINC02011-201ENST00000566553 CCDC88BA6NC98 1476 aa15.15■□□□□ 0.02
LINC02011-201ENST00000566553 HMGXB3Q12766 1538 aa15.13■□□□□ 0.01
LINC02011-201ENST00000566553 RANGAP1P46060 587 aaPredicted RBP15.11■□□□□ 0.01
LINC02011-201ENST00000566553 TOP2AP11388 1531 aaKnown RBP15.1■□□□□ 0.01
LINC02011-201ENST00000566553 TTBK1Q5TCY1 1321 aaPredicted RBP15.08■□□□□ 0
LINC02011-201ENST00000566553 FANCD2Q9BXW9 1451 aa15.04■□□□□ -0
LINC02011-201ENST00000566553 CEP164Q9UPV0 1460 aa15.03■□□□□ -0
LINC02011-201ENST00000566553 CHMP7Q8WUX9 453 aaPredicted RBP14.98□□□□□ -0.01
LINC02011-201ENST00000566553 PEG3Q9GZU2 1588 aa14.94□□□□□ -0.02
LINC02011-201ENST00000566553 CFTRP13569 1480 aa14.91□□□□□ -0.02
LINC02011-201ENST00000566553 UBTFP17480 764 aaKnown RBP14.91□□□□□ -0.02
LINC02011-201ENST00000566553 LAMC3Q9Y6N6 1575 aa14.89□□□□□ -0.03
LINC02011-201ENST00000566553 TDRD9Q8NDG6 1382 aaKnown RBP14.89□□□□□ -0.03
LINC02011-201ENST00000566553 PELP1Q8IZL8 1130 aaKnown RBP14.86□□□□□ -0.03
LINC02011-201ENST00000566553 WRNQ14191 1432 aaPredicted RBP eCLIP14.86□□□□□ -0.03
LINC02011-201ENST00000566553 ATP1B4Q9UN42 357 aaPredicted RBP14.85□□□□□ -0.03
LINC02011-201ENST00000566553 SOGA1O94964 1423 aa14.85□□□□□ -0.03
LINC02011-201ENST00000566553 MRC2Q9UBG0 1479 aa14.84□□□□□ -0.03
LINC02011-201ENST00000566553 CHIC1Q5VXU3 224 aa14.82□□□□□ -0.04
LINC02011-201ENST00000566553 OSCARQ8IYS5 282 aa14.81□□□□□ -0.04
LINC02011-201ENST00000566553 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.74□□□□□ -0.05
LINC02011-201ENST00000566553 HNRNPUL2Q1KMD3 747 aaKnown RBP14.74□□□□□ -0.05
LINC02011-201ENST00000566553 ABCC8Q09428 1581 aa14.74□□□□□ -0.05
LINC02011-201ENST00000566553 RAD54L2Q9Y4B4 1467 aa14.71□□□□□ -0.05
LINC02011-201ENST00000566553 AQRO60306 1485 aaKnown RBP eCLIP14.71□□□□□ -0.06
LINC02011-201ENST00000566553 CUX2O14529 1486 aa14.7□□□□□ -0.06
LINC02011-201ENST00000566553 TOPBP1Q92547 1522 aa14.67□□□□□ -0.06
LINC02011-201ENST00000566553 CSRNP3Q8WYN3 585 aa14.67□□□□□ -0.06
LINC02011-201ENST00000566553 P3H3Q8IVL6 736 aa14.66□□□□□ -0.06
LINC02011-201ENST00000566553 FGD5Q6ZNL6 1462 aa14.65□□□□□ -0.06
LINC02011-201ENST00000566553 CYB5RLQ6IPT4 315 aa14.65□□□□□ -0.06
LINC02011-201ENST00000566553 URB2Q14146 1524 aaKnown RBP14.65□□□□□ -0.07
LINC02011-201ENST00000566553 KIF21AQ7Z4S6 1674 aa14.63□□□□□ -0.07
LINC02011-201ENST00000566553 NPM1P06748 294 aaKnown RBP eCLIP14.63□□□□□ -0.07
LINC02011-201ENST00000566553 TRHP20396 242 aaPredicted RBP14.62□□□□□ -0.07
LINC02011-201ENST00000566553 KIF27Q86VH2 1401 aa14.62□□□□□ -0.07
LINC02011-201ENST00000566553 ARID3CA6NKF2 412 aa14.61□□□□□ -0.07
LINC02011-201ENST00000566553 IFT140Q96RY7 1462 aa14.61□□□□□ -0.07
LINC02011-201ENST00000566553 POLA1P09884 1462 aaPredicted RBP14.59□□□□□ -0.07
LINC02011-201ENST00000566553 APLP2Q06481 763 aa14.56□□□□□ -0.08
LINC02011-201ENST00000566553 ZNF608Q9ULD9 1512 aaPredicted RBP14.55□□□□□ -0.08
LINC02011-201ENST00000566553 GAPVD1Q14C86 1478 aa14.55□□□□□ -0.08
LINC02011-201ENST00000566553 DNMBPQ6XZF7 1577 aa14.54□□□□□ -0.08
LINC02011-201ENST00000566553 LOC105371045A0A1W2PR82 267 aa14.52□□□□□ -0.09
LINC02011-201ENST00000566553 CARMIL1Q5VZK9 1371 aa14.51□□□□□ -0.09
LINC02011-201ENST00000566553 CUX1P39880 1505 aa14.51□□□□□ -0.09
LINC02011-201ENST00000566553 MYT1Q01538 1121 aa14.51□□□□□ -0.09
LINC02011-201ENST00000566553 DNAJC5Q9H3Z4 198 aa14.49□□□□□ -0.09
LINC02011-201ENST00000566553 JPH4Q96JJ6 628 aa14.48□□□□□ -0.09
LINC02011-201ENST00000566553 WDR62O43379 1518 aa14.46□□□□□ -0.09
LINC02011-201ENST00000566553 GRIN2BQ13224 1484 aa14.46□□□□□ -0.09
LINC02011-201ENST00000566553 SNAPC4Q5SXM2 1469 aa14.42□□□□□ -0.1
LINC02011-201ENST00000566553 MYT1LQ9UL68 1186 aa14.42□□□□□ -0.1
LINC02011-201ENST00000566553 THOC2Q8NI27 1593 aaKnown RBP14.4□□□□□ -0.1
LINC02011-201ENST00000566553 SYNJ1O43426 1573 aa14.39□□□□□ -0.11
LINC02011-201ENST00000566553 IGF1RP08069 1367 aa14.38□□□□□ -0.11
LINC02011-201ENST00000566553 KCNH8Q96L42 1107 aa14.37□□□□□ -0.11
LINC02011-201ENST00000566553 RUSC2Q8N2Y8 1516 aa14.33□□□□□ -0.11
LINC02011-201ENST00000566553 FHAD1B1AJZ9 1412 aa14.33□□□□□ -0.12
LINC02011-201ENST00000566553 TOP2BQ02880 1626 aa14.32□□□□□ -0.12
LINC02011-201ENST00000566553 ABCA10Q8WWZ4 1543 aa14.32□□□□□ -0.12
LINC02011-201ENST00000566553 CARMIL2Q6F5E8 1435 aa14.29□□□□□ -0.12
LINC02011-201ENST00000566553 EEA1Q15075 1411 aa14.27□□□□□ -0.12
LINC02011-201ENST00000566553 SYNJ2O15056 1496 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms