Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.31■□□□□ 0.68
AP4B1Q9Y6B7 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP4B1Q9Y6B7 AL162430.1-201ENST00000480705 870 ntBASIC19.31■□□□□ 0.68
AP4B1Q9Y6B7 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
AP4B1Q9Y6B7 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
AP4B1Q9Y6B7 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
AP4B1Q9Y6B7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.31■□□□□ 0.68
AP4B1Q9Y6B7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.31■□□□□ 0.68
AP4B1Q9Y6B7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP4B1Q9Y6B7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP4B1Q9Y6B7 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.3■□□□□ 0.68
AP4B1Q9Y6B7 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP4B1Q9Y6B7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP4B1Q9Y6B7 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.3■□□□□ 0.68
AP4B1Q9Y6B7 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
AP4B1Q9Y6B7 AC079140.4-201ENST00000507448 529 ntBASIC19.3■□□□□ 0.68
AP4B1Q9Y6B7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP4B1Q9Y6B7 AC125437.2-201ENST00000625180 2167 ntBASIC19.3■□□□□ 0.68
AP4B1Q9Y6B7 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP4B1Q9Y6B7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP4B1Q9Y6B7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
AP4B1Q9Y6B7 AC055733.4-201ENST00000638462 1354 ntBASIC19.3■□□□□ 0.68
AP4B1Q9Y6B7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
AP4B1Q9Y6B7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
AP4B1Q9Y6B7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP4B1Q9Y6B7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP4B1Q9Y6B7 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP4B1Q9Y6B7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP4B1Q9Y6B7 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.29■□□□□ 0.68
AP4B1Q9Y6B7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
AP4B1Q9Y6B7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP4B1Q9Y6B7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
AP4B1Q9Y6B7 FP700111.2-201ENST00000619190 1892 ntBASIC19.29■□□□□ 0.68
AP4B1Q9Y6B7 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
AP4B1Q9Y6B7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
AP4B1Q9Y6B7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP4B1Q9Y6B7 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.29■□□□□ 0.68
AP4B1Q9Y6B7 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
AP4B1Q9Y6B7 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.29■□□□□ 0.68
AP4B1Q9Y6B7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
AP4B1Q9Y6B7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
AP4B1Q9Y6B7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
AP4B1Q9Y6B7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP4B1Q9Y6B7 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP4B1Q9Y6B7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.29■□□□□ 0.68
AP4B1Q9Y6B7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP4B1Q9Y6B7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP4B1Q9Y6B7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
AP4B1Q9Y6B7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP4B1Q9Y6B7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP4B1Q9Y6B7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP4B1Q9Y6B7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.28■□□□□ 0.68
AP4B1Q9Y6B7 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.28■□□□□ 0.68
AP4B1Q9Y6B7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.28■□□□□ 0.68
AP4B1Q9Y6B7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP4B1Q9Y6B7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.28■□□□□ 0.68
AP4B1Q9Y6B7 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
AP4B1Q9Y6B7 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP4B1Q9Y6B7 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.28■□□□□ 0.68
AP4B1Q9Y6B7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.28■□□□□ 0.68
AP4B1Q9Y6B7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.28■□□□□ 0.68
AP4B1Q9Y6B7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
AP4B1Q9Y6B7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.28■□□□□ 0.68
AP4B1Q9Y6B7 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.28■□□□□ 0.68
AP4B1Q9Y6B7 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP4B1Q9Y6B7 NTF6G-201ENST00000591094 616 ntBASIC19.28■□□□□ 0.68
AP4B1Q9Y6B7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.28■□□□□ 0.68
AP4B1Q9Y6B7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP4B1Q9Y6B7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP4B1Q9Y6B7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP4B1Q9Y6B7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.28■□□□□ 0.68
AP4B1Q9Y6B7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP4B1Q9Y6B7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.28■□□□□ 0.68
AP4B1Q9Y6B7 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP4B1Q9Y6B7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
AP4B1Q9Y6B7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP4B1Q9Y6B7 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
AP4B1Q9Y6B7 AP006587.3-201ENST00000525742 1516 ntBASIC19.27■□□□□ 0.68
AP4B1Q9Y6B7 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP4B1Q9Y6B7 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
AP4B1Q9Y6B7 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP4B1Q9Y6B7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
AP4B1Q9Y6B7 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.27■□□□□ 0.68
AP4B1Q9Y6B7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.27■□□□□ 0.68
AP4B1Q9Y6B7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.27■□□□□ 0.68
AP4B1Q9Y6B7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.27■□□□□ 0.68
AP4B1Q9Y6B7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
AP4B1Q9Y6B7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.27■□□□□ 0.68
AP4B1Q9Y6B7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
AP4B1Q9Y6B7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
AP4B1Q9Y6B7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
AP4B1Q9Y6B7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
AP4B1Q9Y6B7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
AP4B1Q9Y6B7 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
AP4B1Q9Y6B7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.26■□□□□ 0.67
AP4B1Q9Y6B7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
AP4B1Q9Y6B7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP4B1Q9Y6B7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.26■□□□□ 0.67
AP4B1Q9Y6B7 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP4B1Q9Y6B7 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms