Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.21■□□□□ 0.99
HCFC2Q9Y5Z7 AC027702.1-201ENST00000563810 1770 ntBASIC21.21■□□□□ 0.99
HCFC2Q9Y5Z7 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HCFC2Q9Y5Z7 UNC93B2-201ENST00000285383 730 ntBASIC21.21■□□□□ 0.99
HCFC2Q9Y5Z7 ARMC10P1-201ENST00000313754 855 ntBASIC21.21■□□□□ 0.99
HCFC2Q9Y5Z7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.21■□□□□ 0.99
HCFC2Q9Y5Z7 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HCFC2Q9Y5Z7 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.21■□□□□ 0.99
HCFC2Q9Y5Z7 AL049597.2-201ENST00000565575 961 ntBASIC21.21■□□□□ 0.99
HCFC2Q9Y5Z7 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.21■□□□□ 0.99
HCFC2Q9Y5Z7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
HCFC2Q9Y5Z7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HCFC2Q9Y5Z7 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
HCFC2Q9Y5Z7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HCFC2Q9Y5Z7 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
HCFC2Q9Y5Z7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HCFC2Q9Y5Z7 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.21■□□□□ 0.99
HCFC2Q9Y5Z7 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HCFC2Q9Y5Z7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HCFC2Q9Y5Z7 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
HCFC2Q9Y5Z7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.2■□□□□ 0.99
HCFC2Q9Y5Z7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.2■□□□□ 0.98
HCFC2Q9Y5Z7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.2■□□□□ 0.98
HCFC2Q9Y5Z7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
HCFC2Q9Y5Z7 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HCFC2Q9Y5Z7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HCFC2Q9Y5Z7 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
HCFC2Q9Y5Z7 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HCFC2Q9Y5Z7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
HCFC2Q9Y5Z7 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.2■□□□□ 0.98
HCFC2Q9Y5Z7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.2■□□□□ 0.98
HCFC2Q9Y5Z7 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.2■□□□□ 0.98
HCFC2Q9Y5Z7 AP002982.1-201ENST00000492365 877 ntBASIC21.2■□□□□ 0.98
HCFC2Q9Y5Z7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.2■□□□□ 0.98
HCFC2Q9Y5Z7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.2■□□□□ 0.98
HCFC2Q9Y5Z7 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.2■□□□□ 0.98
HCFC2Q9Y5Z7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.2■□□□□ 0.98
HCFC2Q9Y5Z7 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.2■□□□□ 0.98
HCFC2Q9Y5Z7 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HCFC2Q9Y5Z7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HCFC2Q9Y5Z7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HCFC2Q9Y5Z7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.2■□□□□ 0.98
HCFC2Q9Y5Z7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HCFC2Q9Y5Z7 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HCFC2Q9Y5Z7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HCFC2Q9Y5Z7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.19■□□□□ 0.98
HCFC2Q9Y5Z7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.19■□□□□ 0.98
HCFC2Q9Y5Z7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.19■□□□□ 0.98
HCFC2Q9Y5Z7 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.19■□□□□ 0.98
HCFC2Q9Y5Z7 AL590326.2-201ENST00000625139 305 ntBASIC21.19■□□□□ 0.98
HCFC2Q9Y5Z7 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.19■□□□□ 0.98
HCFC2Q9Y5Z7 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.19■□□□□ 0.98
HCFC2Q9Y5Z7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HCFC2Q9Y5Z7 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HCFC2Q9Y5Z7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HCFC2Q9Y5Z7 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.18■□□□□ 0.98
HCFC2Q9Y5Z7 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
HCFC2Q9Y5Z7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HCFC2Q9Y5Z7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
HCFC2Q9Y5Z7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HCFC2Q9Y5Z7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HCFC2Q9Y5Z7 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HCFC2Q9Y5Z7 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.18■□□□□ 0.98
HCFC2Q9Y5Z7 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.18■□□□□ 0.98
HCFC2Q9Y5Z7 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HCFC2Q9Y5Z7 MIR2861-201ENST00000636310 90 ntBASIC21.18■□□□□ 0.98
HCFC2Q9Y5Z7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
HCFC2Q9Y5Z7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
HCFC2Q9Y5Z7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
HCFC2Q9Y5Z7 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
HCFC2Q9Y5Z7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
HCFC2Q9Y5Z7 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HCFC2Q9Y5Z7 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.18■□□□□ 0.98
HCFC2Q9Y5Z7 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.18■□□□□ 0.98
HCFC2Q9Y5Z7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
HCFC2Q9Y5Z7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HCFC2Q9Y5Z7 AC005521.1-201ENST00000393351 872 ntBASIC21.17■□□□□ 0.98
HCFC2Q9Y5Z7 MIR1238-201ENST00000408483 83 ntBASIC21.17■□□□□ 0.98
HCFC2Q9Y5Z7 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.17■□□□□ 0.98
HCFC2Q9Y5Z7 AL031963.3-201ENST00000606441 850 ntBASIC21.17■□□□□ 0.98
HCFC2Q9Y5Z7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.17■□□□□ 0.98
HCFC2Q9Y5Z7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.17■□□□□ 0.98
HCFC2Q9Y5Z7 ECEL1P1-201ENST00000373592 1742 ntBASIC21.17■□□□□ 0.98
HCFC2Q9Y5Z7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HCFC2Q9Y5Z7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.16■□□□□ 0.98
HCFC2Q9Y5Z7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HCFC2Q9Y5Z7 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
HCFC2Q9Y5Z7 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HCFC2Q9Y5Z7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HCFC2Q9Y5Z7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HCFC2Q9Y5Z7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.16■□□□□ 0.98
HCFC2Q9Y5Z7 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.16■□□□□ 0.98
HCFC2Q9Y5Z7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.16■□□□□ 0.98
HCFC2Q9Y5Z7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.16■□□□□ 0.98
HCFC2Q9Y5Z7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.16■□□□□ 0.98
HCFC2Q9Y5Z7 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HCFC2Q9Y5Z7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.16■□□□□ 0.98
HCFC2Q9Y5Z7 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HCFC2Q9Y5Z7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.15■□□□□ 0.98
HCFC2Q9Y5Z7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms