Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
COL4A3BPQ9Y5P4 AL356652.1-201ENST00000615962 565 ntBASIC22.57■■□□□ 1.2
COL4A3BPQ9Y5P4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC22.57■■□□□ 1.2
COL4A3BPQ9Y5P4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
COL4A3BPQ9Y5P4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC22.57■■□□□ 1.2
COL4A3BPQ9Y5P4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
COL4A3BPQ9Y5P4 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL4A3BPQ9Y5P4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL4A3BPQ9Y5P4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL4A3BPQ9Y5P4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC22.57■■□□□ 1.2
COL4A3BPQ9Y5P4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL4A3BPQ9Y5P4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL4A3BPQ9Y5P4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC22.57■■□□□ 1.2
COL4A3BPQ9Y5P4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
COL4A3BPQ9Y5P4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC22.56■■□□□ 1.2
COL4A3BPQ9Y5P4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC22.56■■□□□ 1.2
COL4A3BPQ9Y5P4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC22.56■■□□□ 1.2
COL4A3BPQ9Y5P4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL4A3BPQ9Y5P4 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
COL4A3BPQ9Y5P4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL4A3BPQ9Y5P4 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL4A3BPQ9Y5P4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC22.56■■□□□ 1.2
COL4A3BPQ9Y5P4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC22.56■■□□□ 1.2
COL4A3BPQ9Y5P4 POU5F1P3-201ENST00000428824 1078 ntBASIC22.56■■□□□ 1.2
COL4A3BPQ9Y5P4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC22.56■■□□□ 1.2
COL4A3BPQ9Y5P4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
COL4A3BPQ9Y5P4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC22.56■■□□□ 1.2
COL4A3BPQ9Y5P4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
COL4A3BPQ9Y5P4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC22.56■■□□□ 1.2
COL4A3BPQ9Y5P4 TMEM191A-211ENST00000637163 1067 ntBASIC22.56■■□□□ 1.2
COL4A3BPQ9Y5P4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
COL4A3BPQ9Y5P4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
COL4A3BPQ9Y5P4 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC22.56■■□□□ 1.2
COL4A3BPQ9Y5P4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL4A3BPQ9Y5P4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL4A3BPQ9Y5P4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC22.56■■□□□ 1.2
COL4A3BPQ9Y5P4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
COL4A3BPQ9Y5P4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL4A3BPQ9Y5P4 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL4A3BPQ9Y5P4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
COL4A3BPQ9Y5P4 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC22.55■■□□□ 1.2
COL4A3BPQ9Y5P4 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL4A3BPQ9Y5P4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL4A3BPQ9Y5P4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL4A3BPQ9Y5P4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL4A3BPQ9Y5P4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL4A3BPQ9Y5P4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC22.55■■□□□ 1.2
COL4A3BPQ9Y5P4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC22.55■■□□□ 1.2
COL4A3BPQ9Y5P4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC22.55■■□□□ 1.2
COL4A3BPQ9Y5P4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
COL4A3BPQ9Y5P4 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC22.55■■□□□ 1.2
COL4A3BPQ9Y5P4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC22.55■■□□□ 1.2
COL4A3BPQ9Y5P4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC22.55■■□□□ 1.2
COL4A3BPQ9Y5P4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL4A3BPQ9Y5P4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC22.55■■□□□ 1.2
COL4A3BPQ9Y5P4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL4A3BPQ9Y5P4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC22.55■■□□□ 1.2
COL4A3BPQ9Y5P4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
COL4A3BPQ9Y5P4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL4A3BPQ9Y5P4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC22.54■■□□□ 1.2
COL4A3BPQ9Y5P4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
COL4A3BPQ9Y5P4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC22.54■■□□□ 1.2
COL4A3BPQ9Y5P4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC22.54■■□□□ 1.2
COL4A3BPQ9Y5P4 HLA-B-256ENST00000639848 1089 ntBASIC22.54■■□□□ 1.2
COL4A3BPQ9Y5P4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL4A3BPQ9Y5P4 AC092720.2-201ENST00000602388 1665 ntBASIC22.54■■□□□ 1.2
COL4A3BPQ9Y5P4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL4A3BPQ9Y5P4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL4A3BPQ9Y5P4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL4A3BPQ9Y5P4 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC22.54■■□□□ 1.2
COL4A3BPQ9Y5P4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL4A3BPQ9Y5P4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC22.53■■□□□ 1.2
COL4A3BPQ9Y5P4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
COL4A3BPQ9Y5P4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
COL4A3BPQ9Y5P4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COL4A3BPQ9Y5P4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL4A3BPQ9Y5P4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC22.53■■□□□ 1.2
COL4A3BPQ9Y5P4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL4A3BPQ9Y5P4 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL4A3BPQ9Y5P4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC22.53■■□□□ 1.2
COL4A3BPQ9Y5P4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COL4A3BPQ9Y5P4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC22.53■■□□□ 1.2
COL4A3BPQ9Y5P4 AC060766.5-201ENST00000590539 871 ntBASIC22.53■■□□□ 1.2
COL4A3BPQ9Y5P4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC22.53■■□□□ 1.2
COL4A3BPQ9Y5P4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL4A3BPQ9Y5P4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
COL4A3BPQ9Y5P4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COL4A3BPQ9Y5P4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COL4A3BPQ9Y5P4 AC020907.5-201ENST00000624372 1936 ntBASIC22.53■■□□□ 1.2
COL4A3BPQ9Y5P4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL4A3BPQ9Y5P4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL4A3BPQ9Y5P4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
COL4A3BPQ9Y5P4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
COL4A3BPQ9Y5P4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL4A3BPQ9Y5P4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL4A3BPQ9Y5P4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL4A3BPQ9Y5P4 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
COL4A3BPQ9Y5P4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
COL4A3BPQ9Y5P4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
COL4A3BPQ9Y5P4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms