Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
PCDHGB1Q9Y5G3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGB1Q9Y5G3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGB1Q9Y5G3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGB1Q9Y5G3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PCDHGB1Q9Y5G3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGB1Q9Y5G3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGB1Q9Y5G3 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGB1Q9Y5G3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
PCDHGB1Q9Y5G3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGB1Q9Y5G3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.43■□□□□ 0.54
PCDHGB1Q9Y5G3 AC105265.2-201ENST00000467189 838 ntBASIC18.43■□□□□ 0.54
PCDHGB1Q9Y5G3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHGB1Q9Y5G3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHGB1Q9Y5G3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGB1Q9Y5G3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.43■□□□□ 0.54
PCDHGB1Q9Y5G3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHGB1Q9Y5G3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.43■□□□□ 0.54
PCDHGB1Q9Y5G3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDHGB1Q9Y5G3 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGB1Q9Y5G3 Z82202.1-201ENST00000623446 1880 ntBASIC18.43■□□□□ 0.54
PCDHGB1Q9Y5G3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHGB1Q9Y5G3 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHGB1Q9Y5G3 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB1Q9Y5G3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB1Q9Y5G3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB1Q9Y5G3 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB1Q9Y5G3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHGB1Q9Y5G3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB1Q9Y5G3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB1Q9Y5G3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB1Q9Y5G3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB1Q9Y5G3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB1Q9Y5G3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB1Q9Y5G3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
PCDHGB1Q9Y5G3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
PCDHGB1Q9Y5G3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB1Q9Y5G3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB1Q9Y5G3 EDA-201ENST00000338901 1233 ntBASIC18.42■□□□□ 0.54
PCDHGB1Q9Y5G3 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB1Q9Y5G3 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHGB1Q9Y5G3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHGB1Q9Y5G3 AC024257.2-201ENST00000549699 147 ntBASIC18.42■□□□□ 0.54
PCDHGB1Q9Y5G3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.42■□□□□ 0.54
PCDHGB1Q9Y5G3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHGB1Q9Y5G3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.42■□□□□ 0.54
PCDHGB1Q9Y5G3 AL355001.2-201ENST00000620617 1191 ntBASIC18.42■□□□□ 0.54
PCDHGB1Q9Y5G3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB1Q9Y5G3 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB1Q9Y5G3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB1Q9Y5G3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB1Q9Y5G3 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB1Q9Y5G3 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PCDHGB1Q9Y5G3 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB1Q9Y5G3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB1Q9Y5G3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB1Q9Y5G3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB1Q9Y5G3 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB1Q9Y5G3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PCDHGB1Q9Y5G3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PCDHGB1Q9Y5G3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.41■□□□□ 0.54
PCDHGB1Q9Y5G3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PCDHGB1Q9Y5G3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGB1Q9Y5G3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGB1Q9Y5G3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGB1Q9Y5G3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PCDHGB1Q9Y5G3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGB1Q9Y5G3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGB1Q9Y5G3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGB1Q9Y5G3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGB1Q9Y5G3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGB1Q9Y5G3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PCDHGB1Q9Y5G3 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGB1Q9Y5G3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGB1Q9Y5G3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGB1Q9Y5G3 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGB1Q9Y5G3 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
PCDHGB1Q9Y5G3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGB1Q9Y5G3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGB1Q9Y5G3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGB1Q9Y5G3 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHGB1Q9Y5G3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB1Q9Y5G3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB1Q9Y5G3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB1Q9Y5G3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHGB1Q9Y5G3 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
PCDHGB1Q9Y5G3 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.4■□□□□ 0.54
PCDHGB1Q9Y5G3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB1Q9Y5G3 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHGB1Q9Y5G3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.4■□□□□ 0.54
PCDHGB1Q9Y5G3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PCDHGB1Q9Y5G3 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHGB1Q9Y5G3 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.4■□□□□ 0.54
PCDHGB1Q9Y5G3 AC005082.1-201ENST00000413042 2259 ntBASIC18.4■□□□□ 0.54
PCDHGB1Q9Y5G3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB1Q9Y5G3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB1Q9Y5G3 AC005224.4-201ENST00000583262 1652 ntBASIC18.4■□□□□ 0.54
PCDHGB1Q9Y5G3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB1Q9Y5G3 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB1Q9Y5G3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms