Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RCL1Q9Y2P8 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.46■□□□□ 0.23
RCL1Q9Y2P8 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
RCL1Q9Y2P8 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RCL1Q9Y2P8 AC133561.4-201ENST00000566112 224 ntBASIC16.46■□□□□ 0.23
RCL1Q9Y2P8 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC16.46■□□□□ 0.23
RCL1Q9Y2P8 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RCL1Q9Y2P8 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
RCL1Q9Y2P8 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RCL1Q9Y2P8 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RCL1Q9Y2P8 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RCL1Q9Y2P8 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.46■□□□□ 0.22
RCL1Q9Y2P8 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
RCL1Q9Y2P8 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
RCL1Q9Y2P8 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.46■□□□□ 0.22
RCL1Q9Y2P8 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RCL1Q9Y2P8 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.45■□□□□ 0.22
RCL1Q9Y2P8 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RCL1Q9Y2P8 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RCL1Q9Y2P8 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RCL1Q9Y2P8 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RCL1Q9Y2P8 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RCL1Q9Y2P8 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC16.45■□□□□ 0.22
RCL1Q9Y2P8 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC16.45■□□□□ 0.22
RCL1Q9Y2P8 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
RCL1Q9Y2P8 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RCL1Q9Y2P8 AC061975.6-201ENST00000579045 1553 ntBASIC16.45■□□□□ 0.22
RCL1Q9Y2P8 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.45■□□□□ 0.22
RCL1Q9Y2P8 AC005224.4-201ENST00000583262 1652 ntBASIC16.45■□□□□ 0.22
RCL1Q9Y2P8 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RCL1Q9Y2P8 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RCL1Q9Y2P8 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RCL1Q9Y2P8 AC093484.2-201ENST00000580996 2166 ntBASIC16.45■□□□□ 0.22
RCL1Q9Y2P8 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.45■□□□□ 0.22
RCL1Q9Y2P8 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RCL1Q9Y2P8 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RCL1Q9Y2P8 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RCL1Q9Y2P8 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.45■□□□□ 0.22
RCL1Q9Y2P8 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RCL1Q9Y2P8 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RCL1Q9Y2P8 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RCL1Q9Y2P8 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RCL1Q9Y2P8 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RCL1Q9Y2P8 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.45■□□□□ 0.22
RCL1Q9Y2P8 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RCL1Q9Y2P8 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC16.45■□□□□ 0.22
RCL1Q9Y2P8 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RCL1Q9Y2P8 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RCL1Q9Y2P8 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
RCL1Q9Y2P8 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RCL1Q9Y2P8 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RCL1Q9Y2P8 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RCL1Q9Y2P8 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RCL1Q9Y2P8 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.44■□□□□ 0.22
RCL1Q9Y2P8 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RCL1Q9Y2P8 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RCL1Q9Y2P8 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RCL1Q9Y2P8 RARRES2P1-201ENST00000474487 481 ntBASIC16.44■□□□□ 0.22
RCL1Q9Y2P8 DUX4L19-201ENST00000557448 1267 ntBASIC16.44■□□□□ 0.22
RCL1Q9Y2P8 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC16.44■□□□□ 0.22
RCL1Q9Y2P8 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC16.44■□□□□ 0.22
RCL1Q9Y2P8 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC16.44■□□□□ 0.22
RCL1Q9Y2P8 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RCL1Q9Y2P8 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RCL1Q9Y2P8 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RCL1Q9Y2P8 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RCL1Q9Y2P8 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RCL1Q9Y2P8 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.44■□□□□ 0.22
RCL1Q9Y2P8 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.44■□□□□ 0.22
RCL1Q9Y2P8 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RCL1Q9Y2P8 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RCL1Q9Y2P8 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.44■□□□□ 0.22
RCL1Q9Y2P8 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RCL1Q9Y2P8 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RCL1Q9Y2P8 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RCL1Q9Y2P8 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RCL1Q9Y2P8 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RCL1Q9Y2P8 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.43■□□□□ 0.22
RCL1Q9Y2P8 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RCL1Q9Y2P8 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RCL1Q9Y2P8 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RCL1Q9Y2P8 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RCL1Q9Y2P8 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC16.43■□□□□ 0.22
RCL1Q9Y2P8 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RCL1Q9Y2P8 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RCL1Q9Y2P8 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RCL1Q9Y2P8 AC020763.4-201ENST00000623414 4170 ntBASIC16.43■□□□□ 0.22
RCL1Q9Y2P8 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.43■□□□□ 0.22
RCL1Q9Y2P8 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RCL1Q9Y2P8 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RCL1Q9Y2P8 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RCL1Q9Y2P8 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RCL1Q9Y2P8 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RCL1Q9Y2P8 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RCL1Q9Y2P8 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RCL1Q9Y2P8 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
RCL1Q9Y2P8 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RCL1Q9Y2P8 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
RCL1Q9Y2P8 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RCL1Q9Y2P8 AL691432.2-201ENST00000607222 2038 ntBASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms