Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC29.11■■■□□ 2.25
SLC52A1Q9NWF4 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC29.11■■■□□ 2.25
SLC52A1Q9NWF4 PTBP1P-201ENST00000554374 1601 ntBASIC29.11■■■□□ 2.25
SLC52A1Q9NWF4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
SLC52A1Q9NWF4 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC29.11■■■□□ 2.25
SLC52A1Q9NWF4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
SLC52A1Q9NWF4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC29.1■■■□□ 2.25
SLC52A1Q9NWF4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC29.1■■■□□ 2.25
SLC52A1Q9NWF4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
SLC52A1Q9NWF4 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC29.1■■■□□ 2.25
SLC52A1Q9NWF4 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC29.1■■■□□ 2.25
SLC52A1Q9NWF4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC29.1■■■□□ 2.25
SLC52A1Q9NWF4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC29.1■■■□□ 2.25
SLC52A1Q9NWF4 NME3-204ENST00000563498 920 ntTSL 2 BASIC29.1■■■□□ 2.25
SLC52A1Q9NWF4 AC010947.1-201ENST00000623454 693 ntBASIC29.1■■■□□ 2.25
SLC52A1Q9NWF4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
SLC52A1Q9NWF4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC29.1■■■□□ 2.25
SLC52A1Q9NWF4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
SLC52A1Q9NWF4 CYP2D8P-201ENST00000433633 1490 ntBASIC29.1■■■□□ 2.25
SLC52A1Q9NWF4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
SLC52A1Q9NWF4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
SLC52A1Q9NWF4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC29.09■■■□□ 2.25
SLC52A1Q9NWF4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC29.09■■■□□ 2.25
SLC52A1Q9NWF4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC29.09■■■□□ 2.25
SLC52A1Q9NWF4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC29.09■■■□□ 2.25
SLC52A1Q9NWF4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC29.09■■■□□ 2.25
SLC52A1Q9NWF4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC29.09■■■□□ 2.25
SLC52A1Q9NWF4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC29.09■■■□□ 2.25
SLC52A1Q9NWF4 NAPSB-206ENST00000562112 1266 ntBASIC29.09■■■□□ 2.25
SLC52A1Q9NWF4 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC29.09■■■□□ 2.25
SLC52A1Q9NWF4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
SLC52A1Q9NWF4 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC29.09■■■□□ 2.25
SLC52A1Q9NWF4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
SLC52A1Q9NWF4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
SLC52A1Q9NWF4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
SLC52A1Q9NWF4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
SLC52A1Q9NWF4 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC29.09■■■□□ 2.25
SLC52A1Q9NWF4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC29.09■■■□□ 2.25
SLC52A1Q9NWF4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC29.08■■■□□ 2.25
SLC52A1Q9NWF4 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
SLC52A1Q9NWF4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
SLC52A1Q9NWF4 TERF1P1-201ENST00000311003 1181 ntBASIC29.08■■■□□ 2.25
SLC52A1Q9NWF4 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC29.08■■■□□ 2.25
SLC52A1Q9NWF4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
SLC52A1Q9NWF4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
SLC52A1Q9NWF4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC29.08■■■□□ 2.25
SLC52A1Q9NWF4 KRT18P22-201ENST00000402024 1347 ntBASIC29.08■■■□□ 2.25
SLC52A1Q9NWF4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
SLC52A1Q9NWF4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
SLC52A1Q9NWF4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC29.08■■■□□ 2.25
SLC52A1Q9NWF4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC29.08■■■□□ 2.25
SLC52A1Q9NWF4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
SLC52A1Q9NWF4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC29.08■■■□□ 2.24
SLC52A1Q9NWF4 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
SLC52A1Q9NWF4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC29.07■■■□□ 2.24
SLC52A1Q9NWF4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC29.07■■■□□ 2.24
SLC52A1Q9NWF4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC29.07■■■□□ 2.24
SLC52A1Q9NWF4 HLA-G-202ENST00000376815 851 ntBASIC29.07■■■□□ 2.24
SLC52A1Q9NWF4 HLA-G-203ENST00000376818 1127 ntBASIC29.07■■■□□ 2.24
SLC52A1Q9NWF4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC29.07■■■□□ 2.24
SLC52A1Q9NWF4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC29.07■■■□□ 2.24
SLC52A1Q9NWF4 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC29.07■■■□□ 2.24
SLC52A1Q9NWF4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC29.07■■■□□ 2.24
SLC52A1Q9NWF4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
SLC52A1Q9NWF4 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC29.07■■■□□ 2.24
SLC52A1Q9NWF4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC29.07■■■□□ 2.24
SLC52A1Q9NWF4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
SLC52A1Q9NWF4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC29.06■■■□□ 2.24
SLC52A1Q9NWF4 ECEL1P1-201ENST00000373592 1742 ntBASIC29.06■■■□□ 2.24
SLC52A1Q9NWF4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
SLC52A1Q9NWF4 KRT16P1-201ENST00000399124 1418 ntBASIC29.06■■■□□ 2.24
SLC52A1Q9NWF4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
SLC52A1Q9NWF4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC29.06■■■□□ 2.24
SLC52A1Q9NWF4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
SLC52A1Q9NWF4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC29.06■■■□□ 2.24
SLC52A1Q9NWF4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC29.06■■■□□ 2.24
SLC52A1Q9NWF4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC29.06■■■□□ 2.24
SLC52A1Q9NWF4 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
SLC52A1Q9NWF4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC29.06■■■□□ 2.24
SLC52A1Q9NWF4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC29.06■■■□□ 2.24
SLC52A1Q9NWF4 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
SLC52A1Q9NWF4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
SLC52A1Q9NWF4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC29.06■■■□□ 2.24
SLC52A1Q9NWF4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
SLC52A1Q9NWF4 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
SLC52A1Q9NWF4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC29.05■■■□□ 2.24
SLC52A1Q9NWF4 AL390955.1-201ENST00000428694 934 ntBASIC29.05■■■□□ 2.24
SLC52A1Q9NWF4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC29.05■■■□□ 2.24
SLC52A1Q9NWF4 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC29.05■■■□□ 2.24
SLC52A1Q9NWF4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC29.05■■■□□ 2.24
SLC52A1Q9NWF4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC29.05■■■□□ 2.24
SLC52A1Q9NWF4 CR392000.1-201ENST00000624770 1228 ntBASIC29.05■■■□□ 2.24
SLC52A1Q9NWF4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
SLC52A1Q9NWF4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC29.04■■■□□ 2.24
SLC52A1Q9NWF4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC29.04■■■□□ 2.24
SLC52A1Q9NWF4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
SLC52A1Q9NWF4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC29.04■■■□□ 2.24
SLC52A1Q9NWF4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC29.04■■■□□ 2.24
SLC52A1Q9NWF4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC29.04■■■□□ 2.24
SLC52A1Q9NWF4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC29.04■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms