Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UBQLN4Q9NRR5 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.56■□□□□ 0.56
UBQLN4Q9NRR5 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBQLN4Q9NRR5 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
UBQLN4Q9NRR5 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBQLN4Q9NRR5 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBQLN4Q9NRR5 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBQLN4Q9NRR5 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.55■□□□□ 0.56
UBQLN4Q9NRR5 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBQLN4Q9NRR5 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UBQLN4Q9NRR5 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.55■□□□□ 0.56
UBQLN4Q9NRR5 MIPEPP3-201ENST00000412105 444 ntBASIC18.55■□□□□ 0.56
UBQLN4Q9NRR5 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
UBQLN4Q9NRR5 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
UBQLN4Q9NRR5 TSPY6P-201ENST00000448518 926 ntBASIC18.55■□□□□ 0.56
UBQLN4Q9NRR5 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.55■□□□□ 0.56
UBQLN4Q9NRR5 C2orf69P4-201ENST00000565394 541 ntBASIC18.55■□□□□ 0.56
UBQLN4Q9NRR5 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.55■□□□□ 0.56
UBQLN4Q9NRR5 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
UBQLN4Q9NRR5 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
UBQLN4Q9NRR5 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.55■□□□□ 0.56
UBQLN4Q9NRR5 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.55■□□□□ 0.56
UBQLN4Q9NRR5 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
UBQLN4Q9NRR5 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBQLN4Q9NRR5 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.55■□□□□ 0.56
UBQLN4Q9NRR5 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBQLN4Q9NRR5 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.55■□□□□ 0.56
UBQLN4Q9NRR5 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBQLN4Q9NRR5 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBQLN4Q9NRR5 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBQLN4Q9NRR5 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
UBQLN4Q9NRR5 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBQLN4Q9NRR5 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
UBQLN4Q9NRR5 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
UBQLN4Q9NRR5 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.54■□□□□ 0.56
UBQLN4Q9NRR5 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBQLN4Q9NRR5 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBQLN4Q9NRR5 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.54■□□□□ 0.56
UBQLN4Q9NRR5 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBQLN4Q9NRR5 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBQLN4Q9NRR5 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBQLN4Q9NRR5 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.54■□□□□ 0.56
UBQLN4Q9NRR5 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.54■□□□□ 0.56
UBQLN4Q9NRR5 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.54■□□□□ 0.56
UBQLN4Q9NRR5 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.54■□□□□ 0.56
UBQLN4Q9NRR5 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.54■□□□□ 0.56
UBQLN4Q9NRR5 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.54■□□□□ 0.56
UBQLN4Q9NRR5 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBQLN4Q9NRR5 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.54■□□□□ 0.56
UBQLN4Q9NRR5 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBQLN4Q9NRR5 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBQLN4Q9NRR5 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.54■□□□□ 0.56
UBQLN4Q9NRR5 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBQLN4Q9NRR5 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.53■□□□□ 0.56
UBQLN4Q9NRR5 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
UBQLN4Q9NRR5 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBQLN4Q9NRR5 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBQLN4Q9NRR5 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBQLN4Q9NRR5 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.53■□□□□ 0.56
UBQLN4Q9NRR5 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
UBQLN4Q9NRR5 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBQLN4Q9NRR5 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBQLN4Q9NRR5 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.53■□□□□ 0.56
UBQLN4Q9NRR5 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.53■□□□□ 0.56
UBQLN4Q9NRR5 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
UBQLN4Q9NRR5 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.53■□□□□ 0.56
UBQLN4Q9NRR5 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.53■□□□□ 0.56
UBQLN4Q9NRR5 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBQLN4Q9NRR5 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBQLN4Q9NRR5 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBQLN4Q9NRR5 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.53■□□□□ 0.56
UBQLN4Q9NRR5 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
UBQLN4Q9NRR5 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBQLN4Q9NRR5 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBQLN4Q9NRR5 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBQLN4Q9NRR5 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.52■□□□□ 0.56
UBQLN4Q9NRR5 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UBQLN4Q9NRR5 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBQLN4Q9NRR5 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UBQLN4Q9NRR5 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
UBQLN4Q9NRR5 GUSBP6-202ENST00000438529 1198 ntBASIC18.52■□□□□ 0.56
UBQLN4Q9NRR5 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.52■□□□□ 0.56
UBQLN4Q9NRR5 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.52■□□□□ 0.56
UBQLN4Q9NRR5 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UBQLN4Q9NRR5 AC092118.2-201ENST00000613495 667 ntBASIC18.52■□□□□ 0.56
UBQLN4Q9NRR5 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.52■□□□□ 0.56
UBQLN4Q9NRR5 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBQLN4Q9NRR5 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
UBQLN4Q9NRR5 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBQLN4Q9NRR5 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBQLN4Q9NRR5 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.52■□□□□ 0.55
UBQLN4Q9NRR5 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
UBQLN4Q9NRR5 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
UBQLN4Q9NRR5 SLC25A24-204ENST00000569674 2357 ntBASIC18.52■□□□□ 0.55
UBQLN4Q9NRR5 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.52■□□□□ 0.55
UBQLN4Q9NRR5 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UBQLN4Q9NRR5 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.51■□□□□ 0.55
UBQLN4Q9NRR5 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBQLN4Q9NRR5 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.51■□□□□ 0.55
UBQLN4Q9NRR5 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms