Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.17■■□□□ 1.3
ZFYVE28Q9HCC9 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC23.17■■□□□ 1.3
ZFYVE28Q9HCC9 USF2-205ENST00000594064 1179 ntTSL 2 BASIC23.17■■□□□ 1.3
ZFYVE28Q9HCC9 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC23.17■■□□□ 1.3
ZFYVE28Q9HCC9 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC23.17■■□□□ 1.3
ZFYVE28Q9HCC9 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.17■■□□□ 1.3
ZFYVE28Q9HCC9 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
ZFYVE28Q9HCC9 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC23.17■■□□□ 1.3
ZFYVE28Q9HCC9 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC23.17■■□□□ 1.3
ZFYVE28Q9HCC9 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
ZFYVE28Q9HCC9 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC23.16■■□□□ 1.3
ZFYVE28Q9HCC9 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
ZFYVE28Q9HCC9 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC23.16■■□□□ 1.3
ZFYVE28Q9HCC9 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
ZFYVE28Q9HCC9 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ZFYVE28Q9HCC9 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC23.16■■□□□ 1.3
ZFYVE28Q9HCC9 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC23.16■■□□□ 1.3
ZFYVE28Q9HCC9 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ZFYVE28Q9HCC9 GRAMD4P8-201ENST00000605465 1115 ntBASIC23.16■■□□□ 1.3
ZFYVE28Q9HCC9 AC006011.2-201ENST00000621313 1158 ntBASIC23.16■■□□□ 1.3
ZFYVE28Q9HCC9 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ZFYVE28Q9HCC9 LGALS8-AS1-201ENST00000487567 1457 ntBASIC23.16■■□□□ 1.3
ZFYVE28Q9HCC9 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC23.16■■□□□ 1.3
ZFYVE28Q9HCC9 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.16■■□□□ 1.3
ZFYVE28Q9HCC9 C1orf229-201ENST00000623686 2258 ntBASIC23.15■■□□□ 1.3
ZFYVE28Q9HCC9 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ZFYVE28Q9HCC9 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC23.15■■□□□ 1.3
ZFYVE28Q9HCC9 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ZFYVE28Q9HCC9 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
ZFYVE28Q9HCC9 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC23.15■■□□□ 1.3
ZFYVE28Q9HCC9 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
ZFYVE28Q9HCC9 C2orf69P3-201ENST00000565542 1120 ntBASIC23.15■■□□□ 1.3
ZFYVE28Q9HCC9 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC23.15■■□□□ 1.3
ZFYVE28Q9HCC9 MFF-203ENST00000349901 1716 ntTSL 2 BASIC23.15■■□□□ 1.3
ZFYVE28Q9HCC9 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
ZFYVE28Q9HCC9 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
ZFYVE28Q9HCC9 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
ZFYVE28Q9HCC9 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC23.14■■□□□ 1.29
ZFYVE28Q9HCC9 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
ZFYVE28Q9HCC9 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC23.14■■□□□ 1.29
ZFYVE28Q9HCC9 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC23.14■■□□□ 1.29
ZFYVE28Q9HCC9 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC23.14■■□□□ 1.29
ZFYVE28Q9HCC9 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC23.14■■□□□ 1.29
ZFYVE28Q9HCC9 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ZFYVE28Q9HCC9 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC23.14■■□□□ 1.29
ZFYVE28Q9HCC9 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
ZFYVE28Q9HCC9 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZFYVE28Q9HCC9 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZFYVE28Q9HCC9 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ZFYVE28Q9HCC9 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ZFYVE28Q9HCC9 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC23.13■■□□□ 1.29
ZFYVE28Q9HCC9 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZFYVE28Q9HCC9 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZFYVE28Q9HCC9 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZFYVE28Q9HCC9 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC23.13■■□□□ 1.29
ZFYVE28Q9HCC9 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ZFYVE28Q9HCC9 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC23.13■■□□□ 1.29
ZFYVE28Q9HCC9 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.13■■□□□ 1.29
ZFYVE28Q9HCC9 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ZFYVE28Q9HCC9 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC23.13■■□□□ 1.29
ZFYVE28Q9HCC9 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZFYVE28Q9HCC9 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZFYVE28Q9HCC9 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC23.13■■□□□ 1.29
ZFYVE28Q9HCC9 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC23.12■■□□□ 1.29
ZFYVE28Q9HCC9 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZFYVE28Q9HCC9 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZFYVE28Q9HCC9 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZFYVE28Q9HCC9 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZFYVE28Q9HCC9 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZFYVE28Q9HCC9 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZFYVE28Q9HCC9 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC23.12■■□□□ 1.29
ZFYVE28Q9HCC9 UPK3BP1-201ENST00000428678 509 ntBASIC23.12■■□□□ 1.29
ZFYVE28Q9HCC9 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC23.12■■□□□ 1.29
ZFYVE28Q9HCC9 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZFYVE28Q9HCC9 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZFYVE28Q9HCC9 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC23.12■■□□□ 1.29
ZFYVE28Q9HCC9 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ZFYVE28Q9HCC9 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC23.12■■□□□ 1.29
ZFYVE28Q9HCC9 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ZFYVE28Q9HCC9 AL031985.4-201ENST00000642138 673 ntBASIC23.12■■□□□ 1.29
ZFYVE28Q9HCC9 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZFYVE28Q9HCC9 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ZFYVE28Q9HCC9 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZFYVE28Q9HCC9 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ZFYVE28Q9HCC9 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
ZFYVE28Q9HCC9 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZFYVE28Q9HCC9 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC23.11■■□□□ 1.29
ZFYVE28Q9HCC9 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
ZFYVE28Q9HCC9 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
ZFYVE28Q9HCC9 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ZFYVE28Q9HCC9 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
ZFYVE28Q9HCC9 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
ZFYVE28Q9HCC9 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC23.11■■□□□ 1.29
ZFYVE28Q9HCC9 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC23.11■■□□□ 1.29
ZFYVE28Q9HCC9 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC23.11■■□□□ 1.29
ZFYVE28Q9HCC9 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
ZFYVE28Q9HCC9 EGLN1P1-201ENST00000531623 762 ntBASIC23.11■■□□□ 1.29
ZFYVE28Q9HCC9 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC23.11■■□□□ 1.29
ZFYVE28Q9HCC9 AC091076.1-201ENST00000610741 619 ntBASIC23.11■■□□□ 1.29
ZFYVE28Q9HCC9 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms