Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC13.48□□□□□ -0.25
SND1-IT1Q9HBX3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SND1-IT1Q9HBX3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SND1-IT1Q9HBX3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SND1-IT1Q9HBX3 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
SND1-IT1Q9HBX3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC13.48□□□□□ -0.25
SND1-IT1Q9HBX3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
SND1-IT1Q9HBX3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SND1-IT1Q9HBX3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
SND1-IT1Q9HBX3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SND1-IT1Q9HBX3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SND1-IT1Q9HBX3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC13.48□□□□□ -0.25
SND1-IT1Q9HBX3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SND1-IT1Q9HBX3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
SND1-IT1Q9HBX3 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC13.48□□□□□ -0.25
SND1-IT1Q9HBX3 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC13.48□□□□□ -0.25
SND1-IT1Q9HBX3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC13.47□□□□□ -0.25
SND1-IT1Q9HBX3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC13.47□□□□□ -0.25
SND1-IT1Q9HBX3 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC13.47□□□□□ -0.25
SND1-IT1Q9HBX3 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SND1-IT1Q9HBX3 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SND1-IT1Q9HBX3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SND1-IT1Q9HBX3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SND1-IT1Q9HBX3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
SND1-IT1Q9HBX3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC13.47□□□□□ -0.25
SND1-IT1Q9HBX3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
SND1-IT1Q9HBX3 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SND1-IT1Q9HBX3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC13.47□□□□□ -0.25
SND1-IT1Q9HBX3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC13.47□□□□□ -0.25
SND1-IT1Q9HBX3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SND1-IT1Q9HBX3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC13.47□□□□□ -0.25
SND1-IT1Q9HBX3 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SND1-IT1Q9HBX3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC13.47□□□□□ -0.25
SND1-IT1Q9HBX3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SND1-IT1Q9HBX3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
SND1-IT1Q9HBX3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SND1-IT1Q9HBX3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SND1-IT1Q9HBX3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SND1-IT1Q9HBX3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC13.47□□□□□ -0.25
SND1-IT1Q9HBX3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
SND1-IT1Q9HBX3 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SND1-IT1Q9HBX3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SND1-IT1Q9HBX3 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SND1-IT1Q9HBX3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SND1-IT1Q9HBX3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
SND1-IT1Q9HBX3 AL158211.5-201ENST00000623583 2518 ntBASIC13.47□□□□□ -0.25
SND1-IT1Q9HBX3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
SND1-IT1Q9HBX3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SND1-IT1Q9HBX3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
SND1-IT1Q9HBX3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SND1-IT1Q9HBX3 HR-201ENST00000312841 5351 ntTSL 5 BASIC13.46□□□□□ -0.25
SND1-IT1Q9HBX3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SND1-IT1Q9HBX3 AC055733.4-201ENST00000638462 1354 ntBASIC13.46□□□□□ -0.25
SND1-IT1Q9HBX3 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SND1-IT1Q9HBX3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SND1-IT1Q9HBX3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SND1-IT1Q9HBX3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
SND1-IT1Q9HBX3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC13.46□□□□□ -0.25
SND1-IT1Q9HBX3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SND1-IT1Q9HBX3 BX005040.4-201ENST00000637145 1518 ntBASIC13.46□□□□□ -0.25
SND1-IT1Q9HBX3 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SND1-IT1Q9HBX3 AC011484.1-201ENST00000377652 1995 ntBASIC13.46□□□□□ -0.25
SND1-IT1Q9HBX3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SND1-IT1Q9HBX3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SND1-IT1Q9HBX3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SND1-IT1Q9HBX3 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SND1-IT1Q9HBX3 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
SND1-IT1Q9HBX3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC13.46□□□□□ -0.25
SND1-IT1Q9HBX3 PTMA-205ENST00000410064 814 ntTSL 2 BASIC13.46□□□□□ -0.25
SND1-IT1Q9HBX3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC13.46□□□□□ -0.25
SND1-IT1Q9HBX3 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC13.46□□□□□ -0.25
SND1-IT1Q9HBX3 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC13.46□□□□□ -0.25
SND1-IT1Q9HBX3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SND1-IT1Q9HBX3 MIR4466-201ENST00000606121 54 ntBASIC13.46□□□□□ -0.25
SND1-IT1Q9HBX3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SND1-IT1Q9HBX3 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SND1-IT1Q9HBX3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
SND1-IT1Q9HBX3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
SND1-IT1Q9HBX3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
SND1-IT1Q9HBX3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SND1-IT1Q9HBX3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
SND1-IT1Q9HBX3 PKD1P1-201ENST00000458669 6805 ntBASIC13.46□□□□□ -0.26
SND1-IT1Q9HBX3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
SND1-IT1Q9HBX3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
SND1-IT1Q9HBX3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
SND1-IT1Q9HBX3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC13.46□□□□□ -0.26
SND1-IT1Q9HBX3 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
SND1-IT1Q9HBX3 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SND1-IT1Q9HBX3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SND1-IT1Q9HBX3 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC13.46□□□□□ -0.26
SND1-IT1Q9HBX3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC13.46□□□□□ -0.26
SND1-IT1Q9HBX3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC13.46□□□□□ -0.26
SND1-IT1Q9HBX3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC13.46□□□□□ -0.26
SND1-IT1Q9HBX3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC13.46□□□□□ -0.26
SND1-IT1Q9HBX3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
SND1-IT1Q9HBX3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC13.45□□□□□ -0.26
SND1-IT1Q9HBX3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SND1-IT1Q9HBX3 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SND1-IT1Q9HBX3 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SND1-IT1Q9HBX3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms