Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDX47Q9H0S4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.98■□□□□ 0.95
DDX47Q9H0S4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.98■□□□□ 0.95
DDX47Q9H0S4 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
DDX47Q9H0S4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.98■□□□□ 0.95
DDX47Q9H0S4 SUDS3P1-201ENST00000505831 966 ntBASIC20.98■□□□□ 0.95
DDX47Q9H0S4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.98■□□□□ 0.95
DDX47Q9H0S4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDX47Q9H0S4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDX47Q9H0S4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
DDX47Q9H0S4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
DDX47Q9H0S4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
DDX47Q9H0S4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.97■□□□□ 0.95
DDX47Q9H0S4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DDX47Q9H0S4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
DDX47Q9H0S4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
DDX47Q9H0S4 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DDX47Q9H0S4 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.97■□□□□ 0.95
DDX47Q9H0S4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DDX47Q9H0S4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DDX47Q9H0S4 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DDX47Q9H0S4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DDX47Q9H0S4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DDX47Q9H0S4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DDX47Q9H0S4 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DDX47Q9H0S4 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.97■□□□□ 0.95
DDX47Q9H0S4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
DDX47Q9H0S4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DDX47Q9H0S4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.97■□□□□ 0.95
DDX47Q9H0S4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
DDX47Q9H0S4 AC104187.1-201ENST00000607510 612 ntBASIC20.97■□□□□ 0.95
DDX47Q9H0S4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.97■□□□□ 0.95
DDX47Q9H0S4 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.97■□□□□ 0.95
DDX47Q9H0S4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.97■□□□□ 0.95
DDX47Q9H0S4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
DDX47Q9H0S4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.97■□□□□ 0.95
DDX47Q9H0S4 AC005332.7-201ENST00000614046 2005 ntBASIC20.97■□□□□ 0.95
DDX47Q9H0S4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
DDX47Q9H0S4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.97■□□□□ 0.95
DDX47Q9H0S4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DDX47Q9H0S4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.96■□□□□ 0.95
DDX47Q9H0S4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.96■□□□□ 0.95
DDX47Q9H0S4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.96■□□□□ 0.95
DDX47Q9H0S4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
DDX47Q9H0S4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.96■□□□□ 0.95
DDX47Q9H0S4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
DDX47Q9H0S4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
DDX47Q9H0S4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
DDX47Q9H0S4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.96■□□□□ 0.95
DDX47Q9H0S4 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDX47Q9H0S4 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
DDX47Q9H0S4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
DDX47Q9H0S4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.96■□□□□ 0.95
DDX47Q9H0S4 DUX4L2-201ENST00000561772 1275 ntBASIC20.96■□□□□ 0.95
DDX47Q9H0S4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.96■□□□□ 0.95
DDX47Q9H0S4 DUX4L6-201ENST00000626483 1275 ntBASIC20.96■□□□□ 0.95
DDX47Q9H0S4 DUX4L1-201ENST00000627662 1275 ntBASIC20.96■□□□□ 0.95
DDX47Q9H0S4 DUX4L8-201ENST00000629013 1275 ntBASIC20.96■□□□□ 0.95
DDX47Q9H0S4 DUX4L3-201ENST00000630187 1275 ntBASIC20.96■□□□□ 0.95
DDX47Q9H0S4 DUX4L7-201ENST00000630678 1275 ntBASIC20.96■□□□□ 0.95
DDX47Q9H0S4 DUX4L5-201ENST00000630834 1275 ntBASIC20.96■□□□□ 0.95
DDX47Q9H0S4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
DDX47Q9H0S4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
DDX47Q9H0S4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDX47Q9H0S4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDX47Q9H0S4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDX47Q9H0S4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DDX47Q9H0S4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.95■□□□□ 0.94
DDX47Q9H0S4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.95■□□□□ 0.94
DDX47Q9H0S4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DDX47Q9H0S4 AC093484.2-201ENST00000580996 2166 ntBASIC20.95■□□□□ 0.94
DDX47Q9H0S4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.95■□□□□ 0.94
DDX47Q9H0S4 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
DDX47Q9H0S4 AC091799.1-201ENST00000422823 811 ntBASIC20.95■□□□□ 0.94
DDX47Q9H0S4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.95■□□□□ 0.94
DDX47Q9H0S4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.95■□□□□ 0.94
DDX47Q9H0S4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
DDX47Q9H0S4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.95■□□□□ 0.94
DDX47Q9H0S4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DDX47Q9H0S4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.95■□□□□ 0.94
DDX47Q9H0S4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DDX47Q9H0S4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DDX47Q9H0S4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
DDX47Q9H0S4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
DDX47Q9H0S4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX47Q9H0S4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
DDX47Q9H0S4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.94■□□□□ 0.94
DDX47Q9H0S4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX47Q9H0S4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX47Q9H0S4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX47Q9H0S4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX47Q9H0S4 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.94■□□□□ 0.94
DDX47Q9H0S4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.94■□□□□ 0.94
DDX47Q9H0S4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.94■□□□□ 0.94
DDX47Q9H0S4 AP001160.3-201ENST00000601484 763 ntBASIC20.94■□□□□ 0.94
DDX47Q9H0S4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.94■□□□□ 0.94
DDX47Q9H0S4 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX47Q9H0S4 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX47Q9H0S4 TREX1-205ENST00000625293 1783 ntBASIC20.94■□□□□ 0.94
DDX47Q9H0S4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms