Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.64■□□□□ 0.57
TM9SF2Q99805 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TM9SF2Q99805 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.64■□□□□ 0.57
TM9SF2Q99805 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.64■□□□□ 0.57
TM9SF2Q99805 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.64■□□□□ 0.57
TM9SF2Q99805 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.64■□□□□ 0.57
TM9SF2Q99805 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.64■□□□□ 0.57
TM9SF2Q99805 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TM9SF2Q99805 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.64■□□□□ 0.57
TM9SF2Q99805 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TM9SF2Q99805 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
TM9SF2Q99805 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.64■□□□□ 0.57
TM9SF2Q99805 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TM9SF2Q99805 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TM9SF2Q99805 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
TM9SF2Q99805 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TM9SF2Q99805 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TM9SF2Q99805 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.63■□□□□ 0.57
TM9SF2Q99805 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TM9SF2Q99805 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TM9SF2Q99805 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TM9SF2Q99805 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.63■□□□□ 0.57
TM9SF2Q99805 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TM9SF2Q99805 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TM9SF2Q99805 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TM9SF2Q99805 AL512625.2-201ENST00000417533 625 ntBASIC18.63■□□□□ 0.57
TM9SF2Q99805 AC245052.3-201ENST00000450182 901 ntBASIC18.63■□□□□ 0.57
TM9SF2Q99805 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.63■□□□□ 0.57
TM9SF2Q99805 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.63■□□□□ 0.57
TM9SF2Q99805 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.63■□□□□ 0.57
TM9SF2Q99805 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TM9SF2Q99805 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TM9SF2Q99805 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.63■□□□□ 0.57
TM9SF2Q99805 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TM9SF2Q99805 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TM9SF2Q99805 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TM9SF2Q99805 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
TM9SF2Q99805 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
TM9SF2Q99805 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TM9SF2Q99805 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TM9SF2Q99805 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
TM9SF2Q99805 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TM9SF2Q99805 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TM9SF2Q99805 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TM9SF2Q99805 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TM9SF2Q99805 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.62■□□□□ 0.57
TM9SF2Q99805 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.62■□□□□ 0.57
TM9SF2Q99805 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
TM9SF2Q99805 AC133041.1-202ENST00000642053 222 ntBASIC18.62■□□□□ 0.57
TM9SF2Q99805 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TM9SF2Q99805 MKRN4P-201ENST00000444706 1521 ntBASIC18.62■□□□□ 0.57
TM9SF2Q99805 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TM9SF2Q99805 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TM9SF2Q99805 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TM9SF2Q99805 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TM9SF2Q99805 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TM9SF2Q99805 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TM9SF2Q99805 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TM9SF2Q99805 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TM9SF2Q99805 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TM9SF2Q99805 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TM9SF2Q99805 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.62■□□□□ 0.57
TM9SF2Q99805 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM9SF2Q99805 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.61■□□□□ 0.57
TM9SF2Q99805 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM9SF2Q99805 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM9SF2Q99805 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TM9SF2Q99805 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.61■□□□□ 0.57
TM9SF2Q99805 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
TM9SF2Q99805 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM9SF2Q99805 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM9SF2Q99805 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
TM9SF2Q99805 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.61■□□□□ 0.57
TM9SF2Q99805 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TM9SF2Q99805 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TM9SF2Q99805 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM9SF2Q99805 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
TM9SF2Q99805 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM9SF2Q99805 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.61■□□□□ 0.57
TM9SF2Q99805 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TM9SF2Q99805 MIR4758-201ENST00000577688 71 ntBASIC18.61■□□□□ 0.57
TM9SF2Q99805 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.61■□□□□ 0.57
TM9SF2Q99805 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
TM9SF2Q99805 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.61■□□□□ 0.57
TM9SF2Q99805 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM9SF2Q99805 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.61■□□□□ 0.57
TM9SF2Q99805 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.61■□□□□ 0.57
TM9SF2Q99805 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM9SF2Q99805 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM9SF2Q99805 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
TM9SF2Q99805 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TM9SF2Q99805 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM9SF2Q99805 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM9SF2Q99805 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM9SF2Q99805 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TM9SF2Q99805 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.6■□□□□ 0.57
TM9SF2Q99805 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM9SF2Q99805 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.6■□□□□ 0.57
TM9SF2Q99805 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM9SF2Q99805 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms