Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
PKP4Q99569 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PKP4Q99569 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PKP4Q99569 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PKP4Q99569 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PKP4Q99569 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PKP4Q99569 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PKP4Q99569 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PKP4Q99569 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PKP4Q99569 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
PKP4Q99569 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PKP4Q99569 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PKP4Q99569 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PKP4Q99569 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.63■□□□□ 0.73
PKP4Q99569 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.63■□□□□ 0.73
PKP4Q99569 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PKP4Q99569 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.63■□□□□ 0.73
PKP4Q99569 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PKP4Q99569 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.63■□□□□ 0.73
PKP4Q99569 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.63■□□□□ 0.73
PKP4Q99569 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.63■□□□□ 0.73
PKP4Q99569 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.63■□□□□ 0.73
PKP4Q99569 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.63■□□□□ 0.73
PKP4Q99569 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.63■□□□□ 0.73
PKP4Q99569 AL138781.1-201ENST00000566567 1274 ntBASIC19.63■□□□□ 0.73
PKP4Q99569 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.63■□□□□ 0.73
PKP4Q99569 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
PKP4Q99569 AC092118.2-201ENST00000613495 667 ntBASIC19.63■□□□□ 0.73
PKP4Q99569 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.63■□□□□ 0.73
PKP4Q99569 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PKP4Q99569 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PKP4Q99569 AC073130.3-201ENST00000624389 2278 ntBASIC19.63■□□□□ 0.73
PKP4Q99569 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.63■□□□□ 0.73
PKP4Q99569 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PKP4Q99569 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PKP4Q99569 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PKP4Q99569 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PKP4Q99569 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PKP4Q99569 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PKP4Q99569 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.62■□□□□ 0.73
PKP4Q99569 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PKP4Q99569 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PKP4Q99569 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
PKP4Q99569 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PKP4Q99569 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PKP4Q99569 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
PKP4Q99569 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.62■□□□□ 0.73
PKP4Q99569 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.62■□□□□ 0.73
PKP4Q99569 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.62■□□□□ 0.73
PKP4Q99569 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PKP4Q99569 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.62■□□□□ 0.73
PKP4Q99569 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.62■□□□□ 0.73
PKP4Q99569 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.62■□□□□ 0.73
PKP4Q99569 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
PKP4Q99569 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PKP4Q99569 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.62■□□□□ 0.73
PKP4Q99569 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PKP4Q99569 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PKP4Q99569 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PKP4Q99569 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PKP4Q99569 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PKP4Q99569 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
PKP4Q99569 HLA-L-209ENST00000420110 1011 ntBASIC19.61■□□□□ 0.73
PKP4Q99569 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.61■□□□□ 0.73
PKP4Q99569 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PKP4Q99569 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
PKP4Q99569 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
PKP4Q99569 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PKP4Q99569 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PKP4Q99569 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PKP4Q99569 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PKP4Q99569 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
PKP4Q99569 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PKP4Q99569 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PKP4Q99569 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PKP4Q99569 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.6■□□□□ 0.73
PKP4Q99569 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.6■□□□□ 0.73
PKP4Q99569 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PKP4Q99569 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PKP4Q99569 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.6■□□□□ 0.73
PKP4Q99569 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.6■□□□□ 0.73
PKP4Q99569 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
PKP4Q99569 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PKP4Q99569 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PKP4Q99569 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PKP4Q99569 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PKP4Q99569 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PKP4Q99569 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.6■□□□□ 0.73
PKP4Q99569 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PKP4Q99569 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
PKP4Q99569 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.6■□□□□ 0.73
PKP4Q99569 DUSP5P2-201ENST00000426873 1033 ntBASIC19.6■□□□□ 0.73
PKP4Q99569 AC098934.4-201ENST00000564127 592 ntBASIC19.6■□□□□ 0.73
PKP4Q99569 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.6■□□□□ 0.73
PKP4Q99569 MIR4758-201ENST00000577688 71 ntBASIC19.6■□□□□ 0.73
PKP4Q99569 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.6■□□□□ 0.73
PKP4Q99569 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PKP4Q99569 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PKP4Q99569 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.6■□□□□ 0.73
PKP4Q99569 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms