Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PTP4A1Q93096 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.09■□□□□ 0.49
PTP4A1Q93096 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTP4A1Q93096 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PTP4A1Q93096 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTP4A1Q93096 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PTP4A1Q93096 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PTP4A1Q93096 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTP4A1Q93096 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.09■□□□□ 0.49
PTP4A1Q93096 AC004854.2-201ENST00000608450 1441 ntBASIC18.09■□□□□ 0.49
PTP4A1Q93096 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTP4A1Q93096 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTP4A1Q93096 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PTP4A1Q93096 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
PTP4A1Q93096 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.09■□□□□ 0.49
PTP4A1Q93096 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PTP4A1Q93096 KRT19P1-201ENST00000405746 1186 ntBASIC18.09■□□□□ 0.49
PTP4A1Q93096 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.09■□□□□ 0.49
PTP4A1Q93096 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PTP4A1Q93096 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.09■□□□□ 0.49
PTP4A1Q93096 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PTP4A1Q93096 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTP4A1Q93096 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTP4A1Q93096 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTP4A1Q93096 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
PTP4A1Q93096 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.09■□□□□ 0.49
PTP4A1Q93096 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PTP4A1Q93096 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PTP4A1Q93096 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.09■□□□□ 0.49
PTP4A1Q93096 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PTP4A1Q93096 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTP4A1Q93096 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTP4A1Q93096 AL020996.1-203ENST00000536896 2307 ntBASIC18.09■□□□□ 0.49
PTP4A1Q93096 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PTP4A1Q93096 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PTP4A1Q93096 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.08■□□□□ 0.49
PTP4A1Q93096 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
PTP4A1Q93096 AC087289.5-201ENST00000586076 3175 ntBASIC18.08■□□□□ 0.49
PTP4A1Q93096 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
PTP4A1Q93096 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.08■□□□□ 0.49
PTP4A1Q93096 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
PTP4A1Q93096 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTP4A1Q93096 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.08■□□□□ 0.48
PTP4A1Q93096 MIR935-201ENST00000401179 91 ntBASIC18.08■□□□□ 0.48
PTP4A1Q93096 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
PTP4A1Q93096 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.08■□□□□ 0.48
PTP4A1Q93096 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
PTP4A1Q93096 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
PTP4A1Q93096 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
PTP4A1Q93096 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.08■□□□□ 0.48
PTP4A1Q93096 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.08■□□□□ 0.48
PTP4A1Q93096 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTP4A1Q93096 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
PTP4A1Q93096 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTP4A1Q93096 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTP4A1Q93096 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
PTP4A1Q93096 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTP4A1Q93096 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTP4A1Q93096 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PTP4A1Q93096 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
PTP4A1Q93096 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTP4A1Q93096 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTP4A1Q93096 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTP4A1Q93096 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PTP4A1Q93096 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTP4A1Q93096 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.07■□□□□ 0.48
PTP4A1Q93096 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTP4A1Q93096 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTP4A1Q93096 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTP4A1Q93096 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.07■□□□□ 0.48
PTP4A1Q93096 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PTP4A1Q93096 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.07■□□□□ 0.48
PTP4A1Q93096 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.07■□□□□ 0.48
PTP4A1Q93096 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.07■□□□□ 0.48
PTP4A1Q93096 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PTP4A1Q93096 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
PTP4A1Q93096 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PTP4A1Q93096 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTP4A1Q93096 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTP4A1Q93096 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTP4A1Q93096 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTP4A1Q93096 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTP4A1Q93096 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTP4A1Q93096 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTP4A1Q93096 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTP4A1Q93096 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.06■□□□□ 0.48
PTP4A1Q93096 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.06■□□□□ 0.48
PTP4A1Q93096 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTP4A1Q93096 TMEM179-206ENST00000616017 1645 ntBASIC18.06■□□□□ 0.48
PTP4A1Q93096 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTP4A1Q93096 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.06■□□□□ 0.48
PTP4A1Q93096 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PTP4A1Q93096 BX119927.1-201ENST00000636596 1552 ntBASIC18.06■□□□□ 0.48
PTP4A1Q93096 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTP4A1Q93096 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.06■□□□□ 0.48
PTP4A1Q93096 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
PTP4A1Q93096 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.06■□□□□ 0.48
PTP4A1Q93096 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTP4A1Q93096 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTP4A1Q93096 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms