Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HPS1Q92902 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.31■□□□□ 0.52
HPS1Q92902 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
HPS1Q92902 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
HPS1Q92902 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HPS1Q92902 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HPS1Q92902 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HPS1Q92902 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HPS1Q92902 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HPS1Q92902 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.31■□□□□ 0.52
HPS1Q92902 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
HPS1Q92902 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HPS1Q92902 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HPS1Q92902 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.31■□□□□ 0.52
HPS1Q92902 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.31■□□□□ 0.52
HPS1Q92902 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.31■□□□□ 0.52
HPS1Q92902 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HPS1Q92902 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HPS1Q92902 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HPS1Q92902 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.31■□□□□ 0.52
HPS1Q92902 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.31■□□□□ 0.52
HPS1Q92902 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.31■□□□□ 0.52
HPS1Q92902 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
HPS1Q92902 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.31■□□□□ 0.52
HPS1Q92902 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
HPS1Q92902 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HPS1Q92902 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HPS1Q92902 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HPS1Q92902 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HPS1Q92902 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HPS1Q92902 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HPS1Q92902 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
HPS1Q92902 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HPS1Q92902 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.3■□□□□ 0.52
HPS1Q92902 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HPS1Q92902 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HPS1Q92902 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HPS1Q92902 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.3■□□□□ 0.52
HPS1Q92902 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HPS1Q92902 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HPS1Q92902 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HPS1Q92902 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HPS1Q92902 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HPS1Q92902 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
HPS1Q92902 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HPS1Q92902 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
HPS1Q92902 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.3■□□□□ 0.52
HPS1Q92902 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HPS1Q92902 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.3■□□□□ 0.52
HPS1Q92902 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HPS1Q92902 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HPS1Q92902 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HPS1Q92902 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HPS1Q92902 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HPS1Q92902 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HPS1Q92902 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HPS1Q92902 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
HPS1Q92902 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
HPS1Q92902 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
HPS1Q92902 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HPS1Q92902 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HPS1Q92902 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HPS1Q92902 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HPS1Q92902 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.29■□□□□ 0.52
HPS1Q92902 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HPS1Q92902 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.29■□□□□ 0.52
HPS1Q92902 AC092437.1-201ENST00000624794 1048 ntBASIC18.29■□□□□ 0.52
HPS1Q92902 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
HPS1Q92902 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HPS1Q92902 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.29■□□□□ 0.52
HPS1Q92902 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HPS1Q92902 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
HPS1Q92902 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HPS1Q92902 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HPS1Q92902 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HPS1Q92902 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HPS1Q92902 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
HPS1Q92902 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.28■□□□□ 0.52
HPS1Q92902 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HPS1Q92902 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
HPS1Q92902 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.28■□□□□ 0.52
HPS1Q92902 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.28■□□□□ 0.52
HPS1Q92902 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.28■□□□□ 0.52
HPS1Q92902 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.28■□□□□ 0.52
HPS1Q92902 OR7E47P-201ENST00000546390 1422 ntBASIC18.28■□□□□ 0.52
HPS1Q92902 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
HPS1Q92902 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HPS1Q92902 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.28■□□□□ 0.52
HPS1Q92902 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HPS1Q92902 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.28■□□□□ 0.52
HPS1Q92902 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HPS1Q92902 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.28■□□□□ 0.52
HPS1Q92902 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HPS1Q92902 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HPS1Q92902 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HPS1Q92902 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HPS1Q92902 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HPS1Q92902 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HPS1Q92902 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HPS1Q92902 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms