Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
RTN4IP1Q8WWV3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTN4IP1Q8WWV3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTN4IP1Q8WWV3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.93■□□□□ 0.3
RTN4IP1Q8WWV3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTN4IP1Q8WWV3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTN4IP1Q8WWV3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTN4IP1Q8WWV3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RTN4IP1Q8WWV3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RTN4IP1Q8WWV3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RTN4IP1Q8WWV3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RTN4IP1Q8WWV3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
RTN4IP1Q8WWV3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.93■□□□□ 0.3
RTN4IP1Q8WWV3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTN4IP1Q8WWV3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTN4IP1Q8WWV3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RTN4IP1Q8WWV3 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTN4IP1Q8WWV3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RTN4IP1Q8WWV3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RTN4IP1Q8WWV3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTN4IP1Q8WWV3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.92■□□□□ 0.3
RTN4IP1Q8WWV3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RTN4IP1Q8WWV3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RTN4IP1Q8WWV3 AC026271.2-201ENST00000428091 497 ntBASIC16.92■□□□□ 0.3
RTN4IP1Q8WWV3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.92■□□□□ 0.3
RTN4IP1Q8WWV3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC16.92■□□□□ 0.3
RTN4IP1Q8WWV3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.92■□□□□ 0.3
RTN4IP1Q8WWV3 AC116562.4-201ENST00000641316 2276 ntBASIC16.92■□□□□ 0.3
RTN4IP1Q8WWV3 KRT16P2-201ENST00000414673 1423 ntBASIC16.92■□□□□ 0.3
RTN4IP1Q8WWV3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTN4IP1Q8WWV3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTN4IP1Q8WWV3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTN4IP1Q8WWV3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTN4IP1Q8WWV3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTN4IP1Q8WWV3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RTN4IP1Q8WWV3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
RTN4IP1Q8WWV3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTN4IP1Q8WWV3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTN4IP1Q8WWV3 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16.91■□□□□ 0.3
RTN4IP1Q8WWV3 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTN4IP1Q8WWV3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
RTN4IP1Q8WWV3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RTN4IP1Q8WWV3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTN4IP1Q8WWV3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RTN4IP1Q8WWV3 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC16.91■□□□□ 0.3
RTN4IP1Q8WWV3 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC16.91■□□□□ 0.3
RTN4IP1Q8WWV3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RTN4IP1Q8WWV3 KRT18P20-201ENST00000548986 1279 ntBASIC16.91■□□□□ 0.3
RTN4IP1Q8WWV3 KRT18P61-201ENST00000585825 1298 ntBASIC16.91■□□□□ 0.3
RTN4IP1Q8WWV3 NTF6G-201ENST00000591094 616 ntBASIC16.91■□□□□ 0.3
RTN4IP1Q8WWV3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTN4IP1Q8WWV3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RTN4IP1Q8WWV3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.91■□□□□ 0.3
RTN4IP1Q8WWV3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
RTN4IP1Q8WWV3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTN4IP1Q8WWV3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTN4IP1Q8WWV3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.91■□□□□ 0.3
RTN4IP1Q8WWV3 AL020996.1-203ENST00000536896 2307 ntBASIC16.91■□□□□ 0.3
RTN4IP1Q8WWV3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RTN4IP1Q8WWV3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.91■□□□□ 0.3
RTN4IP1Q8WWV3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.91■□□□□ 0.3
RTN4IP1Q8WWV3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.91■□□□□ 0.3
RTN4IP1Q8WWV3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTN4IP1Q8WWV3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.9■□□□□ 0.3
RTN4IP1Q8WWV3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RTN4IP1Q8WWV3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTN4IP1Q8WWV3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTN4IP1Q8WWV3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTN4IP1Q8WWV3 AC018445.3-201ENST00000624177 1945 ntBASIC16.9■□□□□ 0.3
RTN4IP1Q8WWV3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.9■□□□□ 0.3
RTN4IP1Q8WWV3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RTN4IP1Q8WWV3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTN4IP1Q8WWV3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.9■□□□□ 0.3
RTN4IP1Q8WWV3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RTN4IP1Q8WWV3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RTN4IP1Q8WWV3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
RTN4IP1Q8WWV3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
RTN4IP1Q8WWV3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RTN4IP1Q8WWV3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTN4IP1Q8WWV3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTN4IP1Q8WWV3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTN4IP1Q8WWV3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.9■□□□□ 0.3
RTN4IP1Q8WWV3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.9■□□□□ 0.3
RTN4IP1Q8WWV3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RTN4IP1Q8WWV3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.9■□□□□ 0.3
RTN4IP1Q8WWV3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RTN4IP1Q8WWV3 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RTN4IP1Q8WWV3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTN4IP1Q8WWV3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTN4IP1Q8WWV3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTN4IP1Q8WWV3 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RTN4IP1Q8WWV3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
RTN4IP1Q8WWV3 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
RTN4IP1Q8WWV3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
RTN4IP1Q8WWV3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RTN4IP1Q8WWV3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC16.89■□□□□ 0.29
RTN4IP1Q8WWV3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.89■□□□□ 0.29
RTN4IP1Q8WWV3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RTN4IP1Q8WWV3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RTN4IP1Q8WWV3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms