Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 PRSS44-201ENST00000515154 1146 ntBASIC18.4■□□□□ 0.54
CHD6Q8TD26 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.4■□□□□ 0.54
CHD6Q8TD26 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CHD6Q8TD26 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHD6Q8TD26 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CHD6Q8TD26 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHD6Q8TD26 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHD6Q8TD26 BX842568.4-201ENST00000421222 227 ntBASIC18.4■□□□□ 0.54
CHD6Q8TD26 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CHD6Q8TD26 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.4■□□□□ 0.54
CHD6Q8TD26 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.4■□□□□ 0.54
CHD6Q8TD26 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHD6Q8TD26 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CHD6Q8TD26 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHD6Q8TD26 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHD6Q8TD26 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHD6Q8TD26 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
CHD6Q8TD26 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
CHD6Q8TD26 MRPL3P1-201ENST00000400109 1033 ntBASIC18.39■□□□□ 0.53
CHD6Q8TD26 KRT18P58-201ENST00000527480 1120 ntBASIC18.39■□□□□ 0.53
CHD6Q8TD26 AL031432.5-201ENST00000641059 760 ntBASIC18.39■□□□□ 0.53
CHD6Q8TD26 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CHD6Q8TD26 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CHD6Q8TD26 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
CHD6Q8TD26 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHD6Q8TD26 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHD6Q8TD26 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHD6Q8TD26 AC005104.2-201ENST00000427818 678 ntBASIC18.39■□□□□ 0.53
CHD6Q8TD26 AC007663.1-201ENST00000438948 1240 ntBASIC18.39■□□□□ 0.53
CHD6Q8TD26 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHD6Q8TD26 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.39■□□□□ 0.53
CHD6Q8TD26 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHD6Q8TD26 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.38■□□□□ 0.53
CHD6Q8TD26 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.38■□□□□ 0.53
CHD6Q8TD26 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHD6Q8TD26 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CHD6Q8TD26 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.38■□□□□ 0.53
CHD6Q8TD26 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CHD6Q8TD26 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.38■□□□□ 0.53
CHD6Q8TD26 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHD6Q8TD26 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.38■□□□□ 0.53
CHD6Q8TD26 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.38■□□□□ 0.53
CHD6Q8TD26 SLC25A1P1-201ENST00000528351 927 ntBASIC18.38■□□□□ 0.53
CHD6Q8TD26 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
CHD6Q8TD26 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CHD6Q8TD26 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHD6Q8TD26 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHD6Q8TD26 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHD6Q8TD26 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHD6Q8TD26 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHD6Q8TD26 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
CHD6Q8TD26 CCR12P-201ENST00000446203 998 ntBASIC18.37■□□□□ 0.53
CHD6Q8TD26 AC011506.1-201ENST00000474329 610 ntBASIC18.37■□□□□ 0.53
CHD6Q8TD26 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHD6Q8TD26 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.37■□□□□ 0.53
CHD6Q8TD26 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.37■□□□□ 0.53
CHD6Q8TD26 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.37■□□□□ 0.53
CHD6Q8TD26 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHD6Q8TD26 AC141257.4-201ENST00000634557 245 ntBASIC18.37■□□□□ 0.53
CHD6Q8TD26 AC136944.6-201ENST00000634818 245 ntBASIC18.37■□□□□ 0.53
CHD6Q8TD26 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHD6Q8TD26 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHD6Q8TD26 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHD6Q8TD26 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.37■□□□□ 0.53
CHD6Q8TD26 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHD6Q8TD26 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHD6Q8TD26 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
CHD6Q8TD26 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.37■□□□□ 0.53
CHD6Q8TD26 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.37■□□□□ 0.53
CHD6Q8TD26 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
CHD6Q8TD26 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.37■□□□□ 0.53
CHD6Q8TD26 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.37■□□□□ 0.53
CHD6Q8TD26 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHD6Q8TD26 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.37■□□□□ 0.53
CHD6Q8TD26 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.37■□□□□ 0.53
CHD6Q8TD26 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CHD6Q8TD26 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CHD6Q8TD26 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHD6Q8TD26 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHD6Q8TD26 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHD6Q8TD26 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHD6Q8TD26 MIR3197-201ENST00000582241 73 ntBASIC18.36■□□□□ 0.53
CHD6Q8TD26 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CHD6Q8TD26 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.36■□□□□ 0.53
CHD6Q8TD26 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHD6Q8TD26 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHD6Q8TD26 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHD6Q8TD26 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHD6Q8TD26 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHD6Q8TD26 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHD6Q8TD26 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.36■□□□□ 0.53
CHD6Q8TD26 AL441883.1-201ENST00000566170 1045 ntBASIC18.36■□□□□ 0.53
CHD6Q8TD26 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHD6Q8TD26 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.36■□□□□ 0.53
CHD6Q8TD26 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHD6Q8TD26 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHD6Q8TD26 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CHD6Q8TD26 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHD6Q8TD26 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.36■□□□□ 0.53
CHD6Q8TD26 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms