Protein–RNA interactions for Protein: Q8NDX1

PSD4, PH and SEC7 domain-containing protein 4, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSD4Q8NDX1 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PSD4Q8NDX1 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PSD4Q8NDX1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PSD4Q8NDX1 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PSD4Q8NDX1 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PSD4Q8NDX1 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PSD4Q8NDX1 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.95■□□□□ 0.62
PSD4Q8NDX1 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.95■□□□□ 0.62
PSD4Q8NDX1 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
PSD4Q8NDX1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PSD4Q8NDX1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PSD4Q8NDX1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.95■□□□□ 0.62
PSD4Q8NDX1 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PSD4Q8NDX1 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PSD4Q8NDX1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PSD4Q8NDX1 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PSD4Q8NDX1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PSD4Q8NDX1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PSD4Q8NDX1 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PSD4Q8NDX1 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.94■□□□□ 0.62
PSD4Q8NDX1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.94■□□□□ 0.62
PSD4Q8NDX1 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.94■□□□□ 0.62
PSD4Q8NDX1 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PSD4Q8NDX1 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PSD4Q8NDX1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PSD4Q8NDX1 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.94■□□□□ 0.62
PSD4Q8NDX1 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.94■□□□□ 0.62
PSD4Q8NDX1 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.94■□□□□ 0.62
PSD4Q8NDX1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.94■□□□□ 0.62
PSD4Q8NDX1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.94■□□□□ 0.62
PSD4Q8NDX1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.94■□□□□ 0.62
PSD4Q8NDX1 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
PSD4Q8NDX1 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.94■□□□□ 0.62
PSD4Q8NDX1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PSD4Q8NDX1 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.94■□□□□ 0.62
PSD4Q8NDX1 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.94■□□□□ 0.62
PSD4Q8NDX1 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PSD4Q8NDX1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PSD4Q8NDX1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PSD4Q8NDX1 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PSD4Q8NDX1 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.93■□□□□ 0.62
PSD4Q8NDX1 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PSD4Q8NDX1 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.93■□□□□ 0.62
PSD4Q8NDX1 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
PSD4Q8NDX1 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.93■□□□□ 0.62
PSD4Q8NDX1 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PSD4Q8NDX1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PSD4Q8NDX1 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.93■□□□□ 0.62
PSD4Q8NDX1 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PSD4Q8NDX1 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.93■□□□□ 0.62
PSD4Q8NDX1 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.93■□□□□ 0.62
PSD4Q8NDX1 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.93■□□□□ 0.62
PSD4Q8NDX1 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.93■□□□□ 0.62
PSD4Q8NDX1 AC100791.3-201ENST00000617619 330 ntBASIC18.93■□□□□ 0.62
PSD4Q8NDX1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PSD4Q8NDX1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
PSD4Q8NDX1 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
PSD4Q8NDX1 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PSD4Q8NDX1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PSD4Q8NDX1 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PSD4Q8NDX1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PSD4Q8NDX1 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.93■□□□□ 0.62
PSD4Q8NDX1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PSD4Q8NDX1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PSD4Q8NDX1 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PSD4Q8NDX1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PSD4Q8NDX1 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PSD4Q8NDX1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PSD4Q8NDX1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PSD4Q8NDX1 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PSD4Q8NDX1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PSD4Q8NDX1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
PSD4Q8NDX1 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PSD4Q8NDX1 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PSD4Q8NDX1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.92■□□□□ 0.62
PSD4Q8NDX1 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PSD4Q8NDX1 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PSD4Q8NDX1 AC116050.2-201ENST00000612102 1779 ntBASIC18.92■□□□□ 0.62
PSD4Q8NDX1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PSD4Q8NDX1 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PSD4Q8NDX1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PSD4Q8NDX1 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PSD4Q8NDX1 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.92■□□□□ 0.62
PSD4Q8NDX1 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.92■□□□□ 0.62
PSD4Q8NDX1 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.92■□□□□ 0.62
PSD4Q8NDX1 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.92■□□□□ 0.62
PSD4Q8NDX1 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PSD4Q8NDX1 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.92■□□□□ 0.62
PSD4Q8NDX1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PSD4Q8NDX1 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.92■□□□□ 0.62
PSD4Q8NDX1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
PSD4Q8NDX1 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
PSD4Q8NDX1 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PSD4Q8NDX1 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PSD4Q8NDX1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.91■□□□□ 0.62
PSD4Q8NDX1 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.91■□□□□ 0.62
PSD4Q8NDX1 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.91■□□□□ 0.62
PSD4Q8NDX1 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PSD4Q8NDX1 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.91■□□□□ 0.62
PSD4Q8NDX1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms