Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LSMEM1Q8N8F7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
LSMEM1Q8N8F7 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LSMEM1Q8N8F7 AC068338.2-201ENST00000563278 1430 ntBASIC18.47■□□□□ 0.55
LSMEM1Q8N8F7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LSMEM1Q8N8F7 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.47■□□□□ 0.55
LSMEM1Q8N8F7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSMEM1Q8N8F7 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSMEM1Q8N8F7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.46■□□□□ 0.55
LSMEM1Q8N8F7 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
LSMEM1Q8N8F7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.46■□□□□ 0.55
LSMEM1Q8N8F7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.46■□□□□ 0.55
LSMEM1Q8N8F7 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSMEM1Q8N8F7 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSMEM1Q8N8F7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSMEM1Q8N8F7 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LSMEM1Q8N8F7 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSMEM1Q8N8F7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
LSMEM1Q8N8F7 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.46■□□□□ 0.55
LSMEM1Q8N8F7 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
LSMEM1Q8N8F7 DPP3P2-201ENST00000416030 1696 ntBASIC18.46■□□□□ 0.55
LSMEM1Q8N8F7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.46■□□□□ 0.55
LSMEM1Q8N8F7 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSMEM1Q8N8F7 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSMEM1Q8N8F7 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.46■□□□□ 0.55
LSMEM1Q8N8F7 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.46■□□□□ 0.55
LSMEM1Q8N8F7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSMEM1Q8N8F7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSMEM1Q8N8F7 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
LSMEM1Q8N8F7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
LSMEM1Q8N8F7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LSMEM1Q8N8F7 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.45■□□□□ 0.54
LSMEM1Q8N8F7 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LSMEM1Q8N8F7 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.45■□□□□ 0.54
LSMEM1Q8N8F7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LSMEM1Q8N8F7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
LSMEM1Q8N8F7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.45■□□□□ 0.54
LSMEM1Q8N8F7 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LSMEM1Q8N8F7 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.45■□□□□ 0.54
LSMEM1Q8N8F7 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
LSMEM1Q8N8F7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.45■□□□□ 0.54
LSMEM1Q8N8F7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.45■□□□□ 0.54
LSMEM1Q8N8F7 AC112907.3-201ENST00000577781 2400 ntBASIC18.45■□□□□ 0.54
LSMEM1Q8N8F7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
LSMEM1Q8N8F7 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LSMEM1Q8N8F7 TCF3P1-201ENST00000423021 1937 ntBASIC18.45■□□□□ 0.54
LSMEM1Q8N8F7 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
LSMEM1Q8N8F7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LSMEM1Q8N8F7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.44■□□□□ 0.54
LSMEM1Q8N8F7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.44■□□□□ 0.54
LSMEM1Q8N8F7 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LSMEM1Q8N8F7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LSMEM1Q8N8F7 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
LSMEM1Q8N8F7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
LSMEM1Q8N8F7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LSMEM1Q8N8F7 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LSMEM1Q8N8F7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
LSMEM1Q8N8F7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
LSMEM1Q8N8F7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
LSMEM1Q8N8F7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LSMEM1Q8N8F7 MCRIP2P1-201ENST00000394346 511 ntBASIC18.44■□□□□ 0.54
LSMEM1Q8N8F7 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.44■□□□□ 0.54
LSMEM1Q8N8F7 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
LSMEM1Q8N8F7 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.44■□□□□ 0.54
LSMEM1Q8N8F7 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
LSMEM1Q8N8F7 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.44■□□□□ 0.54
LSMEM1Q8N8F7 BID-214ENST00000617586 542 ntTSL 5 BASIC18.44■□□□□ 0.54
LSMEM1Q8N8F7 AC231657.2-201ENST00000624556 255 ntBASIC18.44■□□□□ 0.54
LSMEM1Q8N8F7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LSMEM1Q8N8F7 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
LSMEM1Q8N8F7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
LSMEM1Q8N8F7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LSMEM1Q8N8F7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LSMEM1Q8N8F7 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LSMEM1Q8N8F7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.44■□□□□ 0.54
LSMEM1Q8N8F7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LSMEM1Q8N8F7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.44■□□□□ 0.54
LSMEM1Q8N8F7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
LSMEM1Q8N8F7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LSMEM1Q8N8F7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.44■□□□□ 0.54
LSMEM1Q8N8F7 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LSMEM1Q8N8F7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.43■□□□□ 0.54
LSMEM1Q8N8F7 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LSMEM1Q8N8F7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LSMEM1Q8N8F7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.43■□□□□ 0.54
LSMEM1Q8N8F7 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LSMEM1Q8N8F7 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.43■□□□□ 0.54
LSMEM1Q8N8F7 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.43■□□□□ 0.54
LSMEM1Q8N8F7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.43■□□□□ 0.54
LSMEM1Q8N8F7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.43■□□□□ 0.54
LSMEM1Q8N8F7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LSMEM1Q8N8F7 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LSMEM1Q8N8F7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LSMEM1Q8N8F7 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LSMEM1Q8N8F7 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LSMEM1Q8N8F7 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.43■□□□□ 0.54
LSMEM1Q8N8F7 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LSMEM1Q8N8F7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
LSMEM1Q8N8F7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LSMEM1Q8N8F7 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms