Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPSF7Q8N684 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CPSF7Q8N684 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.68■□□□□ 0.74
CPSF7Q8N684 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CPSF7Q8N684 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPSF7Q8N684 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPSF7Q8N684 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.67■□□□□ 0.74
CPSF7Q8N684 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPSF7Q8N684 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPSF7Q8N684 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPSF7Q8N684 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CPSF7Q8N684 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.67■□□□□ 0.74
CPSF7Q8N684 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.67■□□□□ 0.74
CPSF7Q8N684 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.67■□□□□ 0.74
CPSF7Q8N684 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CPSF7Q8N684 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CPSF7Q8N684 MIR2861-201ENST00000636310 90 ntBASIC19.67■□□□□ 0.74
CPSF7Q8N684 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CPSF7Q8N684 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CPSF7Q8N684 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.67■□□□□ 0.74
CPSF7Q8N684 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.67■□□□□ 0.74
CPSF7Q8N684 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPSF7Q8N684 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
CPSF7Q8N684 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.67■□□□□ 0.74
CPSF7Q8N684 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPSF7Q8N684 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPSF7Q8N684 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPSF7Q8N684 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CPSF7Q8N684 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.67■□□□□ 0.74
CPSF7Q8N684 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPSF7Q8N684 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPSF7Q8N684 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CPSF7Q8N684 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPSF7Q8N684 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.66■□□□□ 0.74
CPSF7Q8N684 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CPSF7Q8N684 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CPSF7Q8N684 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.66■□□□□ 0.74
CPSF7Q8N684 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.66■□□□□ 0.74
CPSF7Q8N684 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.66■□□□□ 0.74
CPSF7Q8N684 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.66■□□□□ 0.74
CPSF7Q8N684 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPSF7Q8N684 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CPSF7Q8N684 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPSF7Q8N684 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CPSF7Q8N684 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.66■□□□□ 0.74
CPSF7Q8N684 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.66■□□□□ 0.74
CPSF7Q8N684 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.66■□□□□ 0.74
CPSF7Q8N684 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.66■□□□□ 0.74
CPSF7Q8N684 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.66■□□□□ 0.74
CPSF7Q8N684 AC080038.1-201ENST00000611274 1154 ntBASIC19.66■□□□□ 0.74
CPSF7Q8N684 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPSF7Q8N684 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPSF7Q8N684 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CPSF7Q8N684 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPSF7Q8N684 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CPSF7Q8N684 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CPSF7Q8N684 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPSF7Q8N684 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.65■□□□□ 0.74
CPSF7Q8N684 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CPSF7Q8N684 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CPSF7Q8N684 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPSF7Q8N684 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPSF7Q8N684 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPSF7Q8N684 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
CPSF7Q8N684 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CPSF7Q8N684 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CPSF7Q8N684 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPSF7Q8N684 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPSF7Q8N684 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.65■□□□□ 0.74
CPSF7Q8N684 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CPSF7Q8N684 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPSF7Q8N684 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.65■□□□□ 0.74
CPSF7Q8N684 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.65■□□□□ 0.74
CPSF7Q8N684 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.65■□□□□ 0.74
CPSF7Q8N684 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CPSF7Q8N684 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CPSF7Q8N684 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CPSF7Q8N684 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
CPSF7Q8N684 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CPSF7Q8N684 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.64■□□□□ 0.73
CPSF7Q8N684 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPSF7Q8N684 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.64■□□□□ 0.73
CPSF7Q8N684 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPSF7Q8N684 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CPSF7Q8N684 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPSF7Q8N684 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPSF7Q8N684 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPSF7Q8N684 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPSF7Q8N684 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPSF7Q8N684 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.64■□□□□ 0.73
CPSF7Q8N684 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CPSF7Q8N684 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CPSF7Q8N684 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPSF7Q8N684 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.63■□□□□ 0.73
CPSF7Q8N684 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPSF7Q8N684 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPSF7Q8N684 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPSF7Q8N684 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
CPSF7Q8N684 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.63■□□□□ 0.73
CPSF7Q8N684 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms