Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RP1L1Q8IWN7 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
RP1L1Q8IWN7 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
RP1L1Q8IWN7 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
RP1L1Q8IWN7 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.27■□□□□ 0.51
RP1L1Q8IWN7 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.27■□□□□ 0.51
RP1L1Q8IWN7 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
RP1L1Q8IWN7 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
RP1L1Q8IWN7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.27■□□□□ 0.51
RP1L1Q8IWN7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RP1L1Q8IWN7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.27■□□□□ 0.51
RP1L1Q8IWN7 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.27■□□□□ 0.51
RP1L1Q8IWN7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RP1L1Q8IWN7 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
RP1L1Q8IWN7 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RP1L1Q8IWN7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RP1L1Q8IWN7 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RP1L1Q8IWN7 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RP1L1Q8IWN7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RP1L1Q8IWN7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RP1L1Q8IWN7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RP1L1Q8IWN7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RP1L1Q8IWN7 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RP1L1Q8IWN7 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RP1L1Q8IWN7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RP1L1Q8IWN7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.26■□□□□ 0.51
RP1L1Q8IWN7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RP1L1Q8IWN7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.26■□□□□ 0.51
RP1L1Q8IWN7 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.26■□□□□ 0.51
RP1L1Q8IWN7 AL031963.3-201ENST00000606441 850 ntBASIC18.26■□□□□ 0.51
RP1L1Q8IWN7 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RP1L1Q8IWN7 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RP1L1Q8IWN7 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RP1L1Q8IWN7 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RP1L1Q8IWN7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RP1L1Q8IWN7 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.25■□□□□ 0.51
RP1L1Q8IWN7 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.25■□□□□ 0.51
RP1L1Q8IWN7 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.25■□□□□ 0.51
RP1L1Q8IWN7 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.25■□□□□ 0.51
RP1L1Q8IWN7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RP1L1Q8IWN7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RP1L1Q8IWN7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RP1L1Q8IWN7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.25■□□□□ 0.51
RP1L1Q8IWN7 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RP1L1Q8IWN7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RP1L1Q8IWN7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RP1L1Q8IWN7 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RP1L1Q8IWN7 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RP1L1Q8IWN7 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RP1L1Q8IWN7 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RP1L1Q8IWN7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RP1L1Q8IWN7 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.25■□□□□ 0.51
RP1L1Q8IWN7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RP1L1Q8IWN7 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.25■□□□□ 0.51
RP1L1Q8IWN7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RP1L1Q8IWN7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.25■□□□□ 0.51
RP1L1Q8IWN7 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RP1L1Q8IWN7 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
RP1L1Q8IWN7 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.25■□□□□ 0.51
RP1L1Q8IWN7 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RP1L1Q8IWN7 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RP1L1Q8IWN7 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RP1L1Q8IWN7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.24■□□□□ 0.51
RP1L1Q8IWN7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RP1L1Q8IWN7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RP1L1Q8IWN7 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RP1L1Q8IWN7 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.24■□□□□ 0.51
RP1L1Q8IWN7 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.24■□□□□ 0.51
RP1L1Q8IWN7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.24■□□□□ 0.51
RP1L1Q8IWN7 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RP1L1Q8IWN7 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.24■□□□□ 0.51
RP1L1Q8IWN7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.24■□□□□ 0.51
RP1L1Q8IWN7 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.24■□□□□ 0.51
RP1L1Q8IWN7 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RP1L1Q8IWN7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
RP1L1Q8IWN7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RP1L1Q8IWN7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RP1L1Q8IWN7 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RP1L1Q8IWN7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RP1L1Q8IWN7 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RP1L1Q8IWN7 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RP1L1Q8IWN7 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RP1L1Q8IWN7 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RP1L1Q8IWN7 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.23■□□□□ 0.51
RP1L1Q8IWN7 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RP1L1Q8IWN7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
RP1L1Q8IWN7 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.23■□□□□ 0.51
RP1L1Q8IWN7 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.23■□□□□ 0.51
RP1L1Q8IWN7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RP1L1Q8IWN7 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RP1L1Q8IWN7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RP1L1Q8IWN7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RP1L1Q8IWN7 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RP1L1Q8IWN7 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RP1L1Q8IWN7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RP1L1Q8IWN7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RP1L1Q8IWN7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RP1L1Q8IWN7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RP1L1Q8IWN7 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.23■□□□□ 0.51
RP1L1Q8IWN7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms