Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC60Q8IWA6 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC60Q8IWA6 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC22.49■■□□□ 1.19
CCDC60Q8IWA6 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC60Q8IWA6 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC60Q8IWA6 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC22.48■■□□□ 1.19
CCDC60Q8IWA6 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC60Q8IWA6 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.48■■□□□ 1.19
CCDC60Q8IWA6 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC60Q8IWA6 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC60Q8IWA6 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC60Q8IWA6 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC22.48■■□□□ 1.19
CCDC60Q8IWA6 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC22.48■■□□□ 1.19
CCDC60Q8IWA6 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC22.48■■□□□ 1.19
CCDC60Q8IWA6 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC60Q8IWA6 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC22.48■■□□□ 1.19
CCDC60Q8IWA6 AC124283.5-201ENST00000624661 1809 ntBASIC22.47■■□□□ 1.19
CCDC60Q8IWA6 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC22.47■■□□□ 1.19
CCDC60Q8IWA6 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
CCDC60Q8IWA6 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC22.47■■□□□ 1.19
CCDC60Q8IWA6 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC22.47■■□□□ 1.19
CCDC60Q8IWA6 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC22.47■■□□□ 1.19
CCDC60Q8IWA6 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC22.47■■□□□ 1.19
CCDC60Q8IWA6 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCDC60Q8IWA6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
CCDC60Q8IWA6 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCDC60Q8IWA6 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
CCDC60Q8IWA6 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC22.47■■□□□ 1.19
CCDC60Q8IWA6 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC22.47■■□□□ 1.19
CCDC60Q8IWA6 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.47■■□□□ 1.19
CCDC60Q8IWA6 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC22.46■■□□□ 1.19
CCDC60Q8IWA6 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
CCDC60Q8IWA6 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC60Q8IWA6 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC60Q8IWA6 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC60Q8IWA6 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
CCDC60Q8IWA6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC60Q8IWA6 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC60Q8IWA6 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC60Q8IWA6 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC60Q8IWA6 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC60Q8IWA6 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
CCDC60Q8IWA6 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC60Q8IWA6 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC22.46■■□□□ 1.19
CCDC60Q8IWA6 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC22.46■■□□□ 1.19
CCDC60Q8IWA6 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
CCDC60Q8IWA6 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC22.46■■□□□ 1.19
CCDC60Q8IWA6 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC22.46■■□□□ 1.19
CCDC60Q8IWA6 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC60Q8IWA6 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC60Q8IWA6 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC22.46■■□□□ 1.19
CCDC60Q8IWA6 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC60Q8IWA6 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC60Q8IWA6 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.45■■□□□ 1.19
CCDC60Q8IWA6 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC22.45■■□□□ 1.19
CCDC60Q8IWA6 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC22.45■■□□□ 1.19
CCDC60Q8IWA6 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
CCDC60Q8IWA6 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC60Q8IWA6 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC22.45■■□□□ 1.18
CCDC60Q8IWA6 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC60Q8IWA6 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC60Q8IWA6 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC22.45■■□□□ 1.18
CCDC60Q8IWA6 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC60Q8IWA6 BAALC-201ENST00000297574 801 ntTSL 3 BASIC22.45■■□□□ 1.18
CCDC60Q8IWA6 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC60Q8IWA6 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC22.45■■□□□ 1.18
CCDC60Q8IWA6 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC22.45■■□□□ 1.18
CCDC60Q8IWA6 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC22.45■■□□□ 1.18
CCDC60Q8IWA6 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC22.45■■□□□ 1.18
CCDC60Q8IWA6 USP36-216ENST00000589424 970 ntTSL 5 BASIC22.45■■□□□ 1.18
CCDC60Q8IWA6 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
CCDC60Q8IWA6 FAM197Y4-202ENST00000622692 608 ntBASIC22.45■■□□□ 1.18
CCDC60Q8IWA6 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
CCDC60Q8IWA6 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC60Q8IWA6 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC60Q8IWA6 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
CCDC60Q8IWA6 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC22.45■■□□□ 1.18
CCDC60Q8IWA6 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC60Q8IWA6 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCDC60Q8IWA6 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCDC60Q8IWA6 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCDC60Q8IWA6 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
CCDC60Q8IWA6 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCDC60Q8IWA6 SERF2-207ENST00000409614 582 ntTSL 2 BASIC22.44■■□□□ 1.18
CCDC60Q8IWA6 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CCDC60Q8IWA6 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
CCDC60Q8IWA6 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC22.44■■□□□ 1.18
CCDC60Q8IWA6 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC22.44■■□□□ 1.18
CCDC60Q8IWA6 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CCDC60Q8IWA6 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
CCDC60Q8IWA6 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCDC60Q8IWA6 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC22.44■■□□□ 1.18
CCDC60Q8IWA6 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCDC60Q8IWA6 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC22.44■■□□□ 1.18
CCDC60Q8IWA6 AL023875.1-201ENST00000640777 796 ntBASIC22.44■■□□□ 1.18
CCDC60Q8IWA6 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCDC60Q8IWA6 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCDC60Q8IWA6 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC22.43■■□□□ 1.18
CCDC60Q8IWA6 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCDC60Q8IWA6 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms