Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRFN4Q6PJG9 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRFN4Q6PJG9 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRFN4Q6PJG9 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
LRFN4Q6PJG9 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRFN4Q6PJG9 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
LRFN4Q6PJG9 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.1■□□□□ 0.49
LRFN4Q6PJG9 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.1■□□□□ 0.49
LRFN4Q6PJG9 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRFN4Q6PJG9 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRFN4Q6PJG9 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRFN4Q6PJG9 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRFN4Q6PJG9 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRFN4Q6PJG9 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRFN4Q6PJG9 AC004911.1-201ENST00000416316 871 ntBASIC18.1■□□□□ 0.49
LRFN4Q6PJG9 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.1■□□□□ 0.49
LRFN4Q6PJG9 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRFN4Q6PJG9 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.1■□□□□ 0.49
LRFN4Q6PJG9 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.1■□□□□ 0.49
LRFN4Q6PJG9 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
LRFN4Q6PJG9 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.1■□□□□ 0.49
LRFN4Q6PJG9 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRFN4Q6PJG9 PCDHAC2-203ENST00000615316 3011 ntBASIC18.1■□□□□ 0.49
LRFN4Q6PJG9 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRFN4Q6PJG9 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.1■□□□□ 0.49
LRFN4Q6PJG9 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRFN4Q6PJG9 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRFN4Q6PJG9 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRFN4Q6PJG9 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRFN4Q6PJG9 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRFN4Q6PJG9 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.09■□□□□ 0.49
LRFN4Q6PJG9 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.09■□□□□ 0.49
LRFN4Q6PJG9 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRFN4Q6PJG9 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.09■□□□□ 0.49
LRFN4Q6PJG9 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
LRFN4Q6PJG9 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRFN4Q6PJG9 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
LRFN4Q6PJG9 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRFN4Q6PJG9 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRFN4Q6PJG9 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.09■□□□□ 0.49
LRFN4Q6PJG9 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.09■□□□□ 0.49
LRFN4Q6PJG9 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.09■□□□□ 0.49
LRFN4Q6PJG9 AC231657.2-201ENST00000624556 255 ntBASIC18.09■□□□□ 0.49
LRFN4Q6PJG9 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
LRFN4Q6PJG9 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
LRFN4Q6PJG9 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRFN4Q6PJG9 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
LRFN4Q6PJG9 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRFN4Q6PJG9 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRFN4Q6PJG9 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRFN4Q6PJG9 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
LRFN4Q6PJG9 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRFN4Q6PJG9 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRFN4Q6PJG9 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRFN4Q6PJG9 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRFN4Q6PJG9 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRFN4Q6PJG9 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
LRFN4Q6PJG9 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.08■□□□□ 0.49
LRFN4Q6PJG9 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
LRFN4Q6PJG9 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRFN4Q6PJG9 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.08■□□□□ 0.49
LRFN4Q6PJG9 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
LRFN4Q6PJG9 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.49
LRFN4Q6PJG9 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.49
LRFN4Q6PJG9 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRFN4Q6PJG9 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRFN4Q6PJG9 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
LRFN4Q6PJG9 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.08■□□□□ 0.48
LRFN4Q6PJG9 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRFN4Q6PJG9 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.08■□□□□ 0.48
LRFN4Q6PJG9 AC007322.1-201ENST00000426983 750 ntBASIC18.08■□□□□ 0.48
LRFN4Q6PJG9 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRFN4Q6PJG9 AL137784.2-201ENST00000607332 1000 ntBASIC18.08■□□□□ 0.48
LRFN4Q6PJG9 AC080038.1-201ENST00000611274 1154 ntBASIC18.08■□□□□ 0.48
LRFN4Q6PJG9 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.08■□□□□ 0.48
LRFN4Q6PJG9 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.08■□□□□ 0.48
LRFN4Q6PJG9 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRFN4Q6PJG9 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRFN4Q6PJG9 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
LRFN4Q6PJG9 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRFN4Q6PJG9 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRFN4Q6PJG9 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRFN4Q6PJG9 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.08■□□□□ 0.48
LRFN4Q6PJG9 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRFN4Q6PJG9 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRFN4Q6PJG9 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRFN4Q6PJG9 AC020907.5-201ENST00000624372 1936 ntBASIC18.08■□□□□ 0.48
LRFN4Q6PJG9 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRFN4Q6PJG9 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
LRFN4Q6PJG9 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRFN4Q6PJG9 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
LRFN4Q6PJG9 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRFN4Q6PJG9 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.07■□□□□ 0.48
LRFN4Q6PJG9 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.07■□□□□ 0.48
LRFN4Q6PJG9 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRFN4Q6PJG9 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.07■□□□□ 0.48
LRFN4Q6PJG9 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRFN4Q6PJG9 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.07■□□□□ 0.48
LRFN4Q6PJG9 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.07■□□□□ 0.48
LRFN4Q6PJG9 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms