Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.12■□□□□ 0.97
RNF43Q68DV7 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RNF43Q68DV7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF43Q68DV7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
RNF43Q68DV7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
RNF43Q68DV7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RNF43Q68DV7 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RNF43Q68DV7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
RNF43Q68DV7 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF43Q68DV7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF43Q68DV7 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RNF43Q68DV7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.11■□□□□ 0.97
RNF43Q68DV7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF43Q68DV7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF43Q68DV7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
RNF43Q68DV7 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF43Q68DV7 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF43Q68DV7 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF43Q68DV7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF43Q68DV7 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.11■□□□□ 0.97
RNF43Q68DV7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.11■□□□□ 0.97
RNF43Q68DV7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
RNF43Q68DV7 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF43Q68DV7 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF43Q68DV7 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
RNF43Q68DV7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.11■□□□□ 0.97
RNF43Q68DV7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.11■□□□□ 0.97
RNF43Q68DV7 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF43Q68DV7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF43Q68DV7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF43Q68DV7 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF43Q68DV7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF43Q68DV7 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNF43Q68DV7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNF43Q68DV7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.1■□□□□ 0.97
RNF43Q68DV7 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.1■□□□□ 0.97
RNF43Q68DV7 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF43Q68DV7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
RNF43Q68DV7 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF43Q68DV7 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF43Q68DV7 KRT18P68-201ENST00000392293 1000 ntBASIC21.1■□□□□ 0.97
RNF43Q68DV7 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.1■□□□□ 0.97
RNF43Q68DV7 AC097658.1-201ENST00000475555 843 ntBASIC21.1■□□□□ 0.97
RNF43Q68DV7 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.1■□□□□ 0.97
RNF43Q68DV7 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNF43Q68DV7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.1■□□□□ 0.97
RNF43Q68DV7 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.1■□□□□ 0.97
RNF43Q68DV7 AC006058.3-201ENST00000606217 1069 ntBASIC21.1■□□□□ 0.97
RNF43Q68DV7 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RNF43Q68DV7 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNF43Q68DV7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF43Q68DV7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF43Q68DV7 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.1■□□□□ 0.97
RNF43Q68DV7 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF43Q68DV7 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.1■□□□□ 0.97
RNF43Q68DV7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.1■□□□□ 0.97
RNF43Q68DV7 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.09■□□□□ 0.97
RNF43Q68DV7 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF43Q68DV7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.09■□□□□ 0.97
RNF43Q68DV7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF43Q68DV7 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF43Q68DV7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF43Q68DV7 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
RNF43Q68DV7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
RNF43Q68DV7 LSM12P1-201ENST00000411836 588 ntBASIC21.09■□□□□ 0.97
RNF43Q68DV7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF43Q68DV7 AL589743.5-201ENST00000616611 1050 ntBASIC21.09■□□□□ 0.97
RNF43Q68DV7 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
RNF43Q68DV7 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.09■□□□□ 0.97
RNF43Q68DV7 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.09■□□□□ 0.97
RNF43Q68DV7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.09■□□□□ 0.97
RNF43Q68DV7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
RNF43Q68DV7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF43Q68DV7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.09■□□□□ 0.97
RNF43Q68DV7 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
RNF43Q68DV7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RNF43Q68DV7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RNF43Q68DV7 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF43Q68DV7 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RNF43Q68DV7 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF43Q68DV7 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.08■□□□□ 0.97
RNF43Q68DV7 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF43Q68DV7 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RNF43Q68DV7 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.08■□□□□ 0.97
RNF43Q68DV7 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.08■□□□□ 0.97
RNF43Q68DV7 AC087633.2-202ENST00000565166 1439 ntBASIC21.08■□□□□ 0.97
RNF43Q68DV7 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF43Q68DV7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.08■□□□□ 0.97
RNF43Q68DV7 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RNF43Q68DV7 GABARAPL3-202ENST00000624044 1851 ntBASIC21.08■□□□□ 0.97
RNF43Q68DV7 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.96
RNF43Q68DV7 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RNF43Q68DV7 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RNF43Q68DV7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.08■□□□□ 0.96
RNF43Q68DV7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RNF43Q68DV7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
RNF43Q68DV7 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.08■□□□□ 0.96
RNF43Q68DV7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF43Q68DV7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF43Q68DV7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms