Protein–RNA interactions for Protein: Q5VWM5

PRAMEF9, PRAME family member 9/15, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9Q5VWM5 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PRAMEF9Q5VWM5 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.46■□□□□ 0.71
PRAMEF9Q5VWM5 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.46■□□□□ 0.71
PRAMEF9Q5VWM5 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.46■□□□□ 0.71
PRAMEF9Q5VWM5 AC008694.1-202ENST00000636953 945 ntBASIC19.46■□□□□ 0.71
PRAMEF9Q5VWM5 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.46■□□□□ 0.71
PRAMEF9Q5VWM5 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRAMEF9Q5VWM5 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRAMEF9Q5VWM5 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRAMEF9Q5VWM5 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRAMEF9Q5VWM5 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRAMEF9Q5VWM5 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PRAMEF9Q5VWM5 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRAMEF9Q5VWM5 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRAMEF9Q5VWM5 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRAMEF9Q5VWM5 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PRAMEF9Q5VWM5 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRAMEF9Q5VWM5 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRAMEF9Q5VWM5 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
PRAMEF9Q5VWM5 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PRAMEF9Q5VWM5 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRAMEF9Q5VWM5 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRAMEF9Q5VWM5 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRAMEF9Q5VWM5 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRAMEF9Q5VWM5 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.45■□□□□ 0.7
PRAMEF9Q5VWM5 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRAMEF9Q5VWM5 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEF9Q5VWM5 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEF9Q5VWM5 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.44■□□□□ 0.7
PRAMEF9Q5VWM5 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEF9Q5VWM5 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEF9Q5VWM5 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEF9Q5VWM5 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEF9Q5VWM5 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.44■□□□□ 0.7
PRAMEF9Q5VWM5 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.44■□□□□ 0.7
PRAMEF9Q5VWM5 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
PRAMEF9Q5VWM5 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEF9Q5VWM5 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PRAMEF9Q5VWM5 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEF9Q5VWM5 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEF9Q5VWM5 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEF9Q5VWM5 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PRAMEF9Q5VWM5 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEF9Q5VWM5 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEF9Q5VWM5 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF9Q5VWM5 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PRAMEF9Q5VWM5 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF9Q5VWM5 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF9Q5VWM5 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.43■□□□□ 0.7
PRAMEF9Q5VWM5 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF9Q5VWM5 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF9Q5VWM5 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.43■□□□□ 0.7
PRAMEF9Q5VWM5 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.43■□□□□ 0.7
PRAMEF9Q5VWM5 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.43■□□□□ 0.7
PRAMEF9Q5VWM5 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
PRAMEF9Q5VWM5 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF9Q5VWM5 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF9Q5VWM5 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF9Q5VWM5 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF9Q5VWM5 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.43■□□□□ 0.7
PRAMEF9Q5VWM5 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF9Q5VWM5 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF9Q5VWM5 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.42■□□□□ 0.7
PRAMEF9Q5VWM5 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF9Q5VWM5 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.42■□□□□ 0.7
PRAMEF9Q5VWM5 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF9Q5VWM5 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF9Q5VWM5 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PRAMEF9Q5VWM5 BX119927.1-201ENST00000636596 1552 ntBASIC19.42■□□□□ 0.7
PRAMEF9Q5VWM5 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF9Q5VWM5 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PRAMEF9Q5VWM5 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.42■□□□□ 0.7
PRAMEF9Q5VWM5 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.42■□□□□ 0.7
PRAMEF9Q5VWM5 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.42■□□□□ 0.7
PRAMEF9Q5VWM5 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.42■□□□□ 0.7
PRAMEF9Q5VWM5 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF9Q5VWM5 AC105036.2-201ENST00000569468 176 ntBASIC19.42■□□□□ 0.7
PRAMEF9Q5VWM5 AC092666.2-201ENST00000613287 246 ntBASIC19.42■□□□□ 0.7
PRAMEF9Q5VWM5 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF9Q5VWM5 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.42■□□□□ 0.7
PRAMEF9Q5VWM5 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF9Q5VWM5 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.42■□□□□ 0.7
PRAMEF9Q5VWM5 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF9Q5VWM5 AL691432.2-201ENST00000607222 2038 ntBASIC19.42■□□□□ 0.7
PRAMEF9Q5VWM5 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.42■□□□□ 0.7
PRAMEF9Q5VWM5 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
PRAMEF9Q5VWM5 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF9Q5VWM5 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF9Q5VWM5 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF9Q5VWM5 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PRAMEF9Q5VWM5 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PRAMEF9Q5VWM5 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF9Q5VWM5 AF201337.1-201ENST00000520239 748 ntBASIC19.41■□□□□ 0.7
PRAMEF9Q5VWM5 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
PRAMEF9Q5VWM5 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF9Q5VWM5 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
PRAMEF9Q5VWM5 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.41■□□□□ 0.7
PRAMEF9Q5VWM5 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF9Q5VWM5 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF9Q5VWM5 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms