Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
UBR4Q5T4S7 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBR4Q5T4S7 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC11.16□□□□□ -0.62
UBR4Q5T4S7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBR4Q5T4S7 PTPA-214ENST00000423100 988 ntTSL 2 BASIC11.16□□□□□ -0.62
UBR4Q5T4S7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
UBR4Q5T4S7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBR4Q5T4S7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBR4Q5T4S7 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC11.16□□□□□ -0.62
UBR4Q5T4S7 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC11.16□□□□□ -0.62
UBR4Q5T4S7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC11.16□□□□□ -0.62
UBR4Q5T4S7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
UBR4Q5T4S7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
UBR4Q5T4S7 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBR4Q5T4S7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBR4Q5T4S7 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBR4Q5T4S7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
UBR4Q5T4S7 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC11.16□□□□□ -0.62
UBR4Q5T4S7 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
UBR4Q5T4S7 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC11.16□□□□□ -0.62
UBR4Q5T4S7 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC11.16□□□□□ -0.62
UBR4Q5T4S7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC11.16□□□□□ -0.62
UBR4Q5T4S7 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC11.16□□□□□ -0.62
UBR4Q5T4S7 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
UBR4Q5T4S7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
UBR4Q5T4S7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UBR4Q5T4S7 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
UBR4Q5T4S7 CYP21A1P-202ENST00000354927 1481 ntBASIC11.15□□□□□ -0.62
UBR4Q5T4S7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UBR4Q5T4S7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC11.15□□□□□ -0.62
UBR4Q5T4S7 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UBR4Q5T4S7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC11.15□□□□□ -0.62
UBR4Q5T4S7 PPP1R14BP5-201ENST00000440334 435 ntBASIC11.15□□□□□ -0.62
UBR4Q5T4S7 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC11.15□□□□□ -0.62
UBR4Q5T4S7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
UBR4Q5T4S7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UBR4Q5T4S7 AL590627.1-203ENST00000421194 1026 ntBASIC11.15□□□□□ -0.62
UBR4Q5T4S7 COX20P2-201ENST00000452636 358 ntBASIC11.15□□□□□ -0.62
UBR4Q5T4S7 CNP-204ENST00000472031 1019 ntTSL 2 BASIC11.15□□□□□ -0.62
UBR4Q5T4S7 CYMP-203ENST00000474680 1263 ntBASIC11.15□□□□□ -0.62
UBR4Q5T4S7 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC11.15□□□□□ -0.62
UBR4Q5T4S7 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC11.15□□□□□ -0.62
UBR4Q5T4S7 ABBA01031674.1-201ENST00000635145 728 ntBASIC11.15□□□□□ -0.62
UBR4Q5T4S7 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UBR4Q5T4S7 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UBR4Q5T4S7 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
UBR4Q5T4S7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
UBR4Q5T4S7 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC11.15□□□□□ -0.63
UBR4Q5T4S7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
UBR4Q5T4S7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
UBR4Q5T4S7 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.63
UBR4Q5T4S7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
UBR4Q5T4S7 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
UBR4Q5T4S7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
UBR4Q5T4S7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
UBR4Q5T4S7 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBR4Q5T4S7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBR4Q5T4S7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC11.14□□□□□ -0.63
UBR4Q5T4S7 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC11.14□□□□□ -0.63
UBR4Q5T4S7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBR4Q5T4S7 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC11.14□□□□□ -0.63
UBR4Q5T4S7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
UBR4Q5T4S7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBR4Q5T4S7 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBR4Q5T4S7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
UBR4Q5T4S7 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC11.14□□□□□ -0.63
UBR4Q5T4S7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
UBR4Q5T4S7 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBR4Q5T4S7 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBR4Q5T4S7 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBR4Q5T4S7 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBR4Q5T4S7 SLC25A1P2-201ENST00000430693 912 ntBASIC11.14□□□□□ -0.63
UBR4Q5T4S7 SNX5-210ENST00000481323 562 ntTSL 3 BASIC11.14□□□□□ -0.63
UBR4Q5T4S7 IL11-204ENST00000590625 1028 ntTSL 2 BASIC11.14□□□□□ -0.63
UBR4Q5T4S7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
UBR4Q5T4S7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC11.14□□□□□ -0.63
UBR4Q5T4S7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
UBR4Q5T4S7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
UBR4Q5T4S7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBR4Q5T4S7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBR4Q5T4S7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC11.14□□□□□ -0.63
UBR4Q5T4S7 AP002383.4-201ENST00000442518 975 ntBASIC11.14□□□□□ -0.63
UBR4Q5T4S7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC11.14□□□□□ -0.63
UBR4Q5T4S7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBR4Q5T4S7 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBR4Q5T4S7 HLA-G-203ENST00000376818 1127 ntBASIC11.14□□□□□ -0.63
UBR4Q5T4S7 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
UBR4Q5T4S7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC11.14□□□□□ -0.63
UBR4Q5T4S7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBR4Q5T4S7 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
UBR4Q5T4S7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBR4Q5T4S7 CDV3P1-201ENST00000471403 739 ntBASIC11.13□□□□□ -0.63
UBR4Q5T4S7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC11.13□□□□□ -0.63
UBR4Q5T4S7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBR4Q5T4S7 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBR4Q5T4S7 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBR4Q5T4S7 PAWRP1-201ENST00000451083 565 ntBASIC11.13□□□□□ -0.63
UBR4Q5T4S7 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBR4Q5T4S7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
UBR4Q5T4S7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms