Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBA52P62987 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBA52P62987 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
UBA52P62987 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.31■□□□□ 0.36
UBA52P62987 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBA52P62987 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBA52P62987 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBA52P62987 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.31■□□□□ 0.36
UBA52P62987 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.31■□□□□ 0.36
UBA52P62987 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBA52P62987 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBA52P62987 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
UBA52P62987 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBA52P62987 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBA52P62987 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
UBA52P62987 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBA52P62987 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.31■□□□□ 0.36
UBA52P62987 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBA52P62987 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.31■□□□□ 0.36
UBA52P62987 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBA52P62987 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
UBA52P62987 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBA52P62987 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBA52P62987 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.31■□□□□ 0.36
UBA52P62987 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBA52P62987 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBA52P62987 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
UBA52P62987 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBA52P62987 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.3■□□□□ 0.36
UBA52P62987 AC009237.3-201ENST00000393279 1427 ntBASIC17.3■□□□□ 0.36
UBA52P62987 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBA52P62987 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UBA52P62987 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UBA52P62987 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBA52P62987 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.3■□□□□ 0.36
UBA52P62987 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBA52P62987 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBA52P62987 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UBA52P62987 AC007322.1-201ENST00000426983 750 ntBASIC17.3■□□□□ 0.36
UBA52P62987 AC083906.2-201ENST00000511578 360 ntBASIC17.3■□□□□ 0.36
UBA52P62987 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.3■□□□□ 0.36
UBA52P62987 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBA52P62987 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.3■□□□□ 0.36
UBA52P62987 AL050303.2-201ENST00000619798 666 ntBASIC17.3■□□□□ 0.36
UBA52P62987 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.3■□□□□ 0.36
UBA52P62987 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBA52P62987 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
UBA52P62987 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
UBA52P62987 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.3■□□□□ 0.36
UBA52P62987 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
UBA52P62987 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UBA52P62987 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBA52P62987 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
UBA52P62987 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.3■□□□□ 0.36
UBA52P62987 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
UBA52P62987 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.29■□□□□ 0.36
UBA52P62987 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.29■□□□□ 0.36
UBA52P62987 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBA52P62987 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UBA52P62987 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBA52P62987 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.29■□□□□ 0.36
UBA52P62987 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UBA52P62987 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.29■□□□□ 0.36
UBA52P62987 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UBA52P62987 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UBA52P62987 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
UBA52P62987 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBA52P62987 AC006128.1-201ENST00000624704 1661 ntBASIC17.29■□□□□ 0.36
UBA52P62987 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.29■□□□□ 0.36
UBA52P62987 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UBA52P62987 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBA52P62987 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBA52P62987 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBA52P62987 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBA52P62987 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBA52P62987 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
UBA52P62987 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBA52P62987 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBA52P62987 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBA52P62987 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
UBA52P62987 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBA52P62987 TSPY6P-201ENST00000448518 926 ntBASIC17.28■□□□□ 0.36
UBA52P62987 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.28■□□□□ 0.36
UBA52P62987 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.28■□□□□ 0.36
UBA52P62987 UBE2DNL-204ENST00000602536 740 ntBASIC17.28■□□□□ 0.36
UBA52P62987 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBA52P62987 AC005181.1-201ENST00000604782 1256 ntBASIC17.28■□□□□ 0.36
UBA52P62987 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBA52P62987 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
UBA52P62987 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
UBA52P62987 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.28■□□□□ 0.36
UBA52P62987 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBA52P62987 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
UBA52P62987 TNXA-203ENST00000507684 2038 ntBASIC17.28■□□□□ 0.36
UBA52P62987 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
UBA52P62987 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBA52P62987 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBA52P62987 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
UBA52P62987 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBA52P62987 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms