Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAB5BP61020 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAB5BP61020 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RAB5BP61020 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAB5BP61020 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAB5BP61020 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RAB5BP61020 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAB5BP61020 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC15.84■□□□□ 0.13
RAB5BP61020 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
RAB5BP61020 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
RAB5BP61020 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB5BP61020 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB5BP61020 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.84■□□□□ 0.13
RAB5BP61020 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RAB5BP61020 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.84■□□□□ 0.13
RAB5BP61020 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB5BP61020 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RAB5BP61020 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC15.84■□□□□ 0.13
RAB5BP61020 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
RAB5BP61020 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC15.84■□□□□ 0.13
RAB5BP61020 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB5BP61020 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RAB5BP61020 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RAB5BP61020 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC15.84■□□□□ 0.13
RAB5BP61020 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC15.84■□□□□ 0.13
RAB5BP61020 CA15P2-201ENST00000611168 834 ntBASIC15.84■□□□□ 0.13
RAB5BP61020 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RAB5BP61020 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
RAB5BP61020 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
RAB5BP61020 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RAB5BP61020 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RAB5BP61020 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.84■□□□□ 0.13
RAB5BP61020 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB5BP61020 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB5BP61020 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB5BP61020 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RAB5BP61020 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB5BP61020 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.84■□□□□ 0.13
RAB5BP61020 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.83■□□□□ 0.13
RAB5BP61020 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
RAB5BP61020 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RAB5BP61020 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RAB5BP61020 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RAB5BP61020 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB5BP61020 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RAB5BP61020 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB5BP61020 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB5BP61020 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB5BP61020 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB5BP61020 AC104581.1-202ENST00000635932 2618 ntBASIC15.83■□□□□ 0.12
RAB5BP61020 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB5BP61020 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB5BP61020 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RAB5BP61020 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.83■□□□□ 0.12
RAB5BP61020 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
RAB5BP61020 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB5BP61020 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.83■□□□□ 0.12
RAB5BP61020 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RAB5BP61020 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
RAB5BP61020 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RAB5BP61020 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB5BP61020 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB5BP61020 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.83■□□□□ 0.12
RAB5BP61020 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB5BP61020 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.82■□□□□ 0.12
RAB5BP61020 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC15.82■□□□□ 0.12
RAB5BP61020 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAB5BP61020 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB5BP61020 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
RAB5BP61020 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC15.82■□□□□ 0.12
RAB5BP61020 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB5BP61020 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAB5BP61020 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
RAB5BP61020 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.82■□□□□ 0.12
RAB5BP61020 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB5BP61020 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB5BP61020 AC093484.2-201ENST00000580996 2166 ntBASIC15.82■□□□□ 0.12
RAB5BP61020 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RAB5BP61020 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAB5BP61020 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.82■□□□□ 0.12
RAB5BP61020 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB5BP61020 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB5BP61020 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC15.82■□□□□ 0.12
RAB5BP61020 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB5BP61020 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB5BP61020 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB5BP61020 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAB5BP61020 USF2-207ENST00000595068 1612 ntTSL 5 BASIC15.82■□□□□ 0.12
RAB5BP61020 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAB5BP61020 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAB5BP61020 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB5BP61020 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB5BP61020 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.82■□□□□ 0.12
RAB5BP61020 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC15.82■□□□□ 0.12
RAB5BP61020 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAB5BP61020 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB5BP61020 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB5BP61020 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB5BP61020 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB5BP61020 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms