Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB38P57729 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB38P57729 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RAB38P57729 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB38P57729 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB38P57729 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.97■□□□□ 0.63
RAB38P57729 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB38P57729 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB38P57729 AC023632.3-201ENST00000521633 145 ntBASIC18.97■□□□□ 0.63
RAB38P57729 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.97■□□□□ 0.63
RAB38P57729 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.97■□□□□ 0.63
RAB38P57729 AC060766.5-201ENST00000590539 871 ntBASIC18.97■□□□□ 0.63
RAB38P57729 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.97■□□□□ 0.63
RAB38P57729 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.97■□□□□ 0.63
RAB38P57729 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB38P57729 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.97■□□□□ 0.63
RAB38P57729 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB38P57729 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
RAB38P57729 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.97■□□□□ 0.63
RAB38P57729 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.97■□□□□ 0.63
RAB38P57729 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
RAB38P57729 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB38P57729 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
RAB38P57729 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB38P57729 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB38P57729 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB38P57729 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB38P57729 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.96■□□□□ 0.63
RAB38P57729 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.96■□□□□ 0.63
RAB38P57729 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.96■□□□□ 0.63
RAB38P57729 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB38P57729 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.96■□□□□ 0.63
RAB38P57729 KRT18P6-201ENST00000555540 1265 ntBASIC18.96■□□□□ 0.63
RAB38P57729 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB38P57729 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.96■□□□□ 0.63
RAB38P57729 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.96■□□□□ 0.63
RAB38P57729 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB38P57729 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB38P57729 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.96■□□□□ 0.63
RAB38P57729 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB38P57729 SMG8-203ENST00000578922 2178 ntBASIC18.96■□□□□ 0.63
RAB38P57729 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB38P57729 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RAB38P57729 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB38P57729 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB38P57729 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB38P57729 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.95■□□□□ 0.62
RAB38P57729 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RAB38P57729 AL157384.1-201ENST00000445995 2473 ntBASIC18.95■□□□□ 0.62
RAB38P57729 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
RAB38P57729 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.95■□□□□ 0.62
RAB38P57729 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.95■□□□□ 0.62
RAB38P57729 AC092368.3-202ENST00000574180 1591 ntBASIC18.95■□□□□ 0.62
RAB38P57729 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB38P57729 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB38P57729 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB38P57729 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB38P57729 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.95■□□□□ 0.62
RAB38P57729 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB38P57729 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RAB38P57729 AL031963.3-201ENST00000606441 850 ntBASIC18.95■□□□□ 0.62
RAB38P57729 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.95■□□□□ 0.62
RAB38P57729 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
RAB38P57729 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.95■□□□□ 0.62
RAB38P57729 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.95■□□□□ 0.62
RAB38P57729 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RAB38P57729 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.95■□□□□ 0.62
RAB38P57729 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB38P57729 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB38P57729 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB38P57729 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
RAB38P57729 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB38P57729 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAB38P57729 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.94■□□□□ 0.62
RAB38P57729 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.94■□□□□ 0.62
RAB38P57729 LINC01006-201ENST00000333319 2292 ntBASIC18.94■□□□□ 0.62
RAB38P57729 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RAB38P57729 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.94■□□□□ 0.62
RAB38P57729 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB38P57729 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAB38P57729 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RAB38P57729 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.94■□□□□ 0.62
RAB38P57729 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.94■□□□□ 0.62
RAB38P57729 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.94■□□□□ 0.62
RAB38P57729 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.94■□□□□ 0.62
RAB38P57729 PNMA6B-201ENST00000538162 1200 ntBASIC18.94■□□□□ 0.62
RAB38P57729 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAB38P57729 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.94■□□□□ 0.62
RAB38P57729 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.94■□□□□ 0.62
RAB38P57729 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB38P57729 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAB38P57729 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.94■□□□□ 0.62
RAB38P57729 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.94■□□□□ 0.62
RAB38P57729 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB38P57729 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
RAB38P57729 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAB38P57729 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.94■□□□□ 0.62
RAB38P57729 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RAB38P57729 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB38P57729 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms