Protein–RNA interactions for Protein: P55084

HADHB, Trifunctional enzyme subunit beta, mitochondrial, humanhuman

Known RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHBP55084 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
HADHBP55084 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HADHBP55084 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HADHBP55084 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HADHBP55084 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HADHBP55084 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HADHBP55084 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HADHBP55084 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.15■□□□□ 0.98
HADHBP55084 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.15■□□□□ 0.98
HADHBP55084 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HADHBP55084 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.15■□□□□ 0.98
HADHBP55084 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HADHBP55084 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
HADHBP55084 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.14■□□□□ 0.98
HADHBP55084 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.14■□□□□ 0.98
HADHBP55084 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.14■□□□□ 0.98
HADHBP55084 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.14■□□□□ 0.98
HADHBP55084 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
HADHBP55084 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HADHBP55084 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.14■□□□□ 0.98
HADHBP55084 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HADHBP55084 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.14■□□□□ 0.98
HADHBP55084 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
HADHBP55084 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HADHBP55084 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.14■□□□□ 0.97
HADHBP55084 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HADHBP55084 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
HADHBP55084 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.14■□□□□ 0.97
HADHBP55084 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.14■□□□□ 0.97
HADHBP55084 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HADHBP55084 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HADHBP55084 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HADHBP55084 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.14■□□□□ 0.97
HADHBP55084 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.14■□□□□ 0.97
HADHBP55084 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.14■□□□□ 0.97
HADHBP55084 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.14■□□□□ 0.97
HADHBP55084 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HADHBP55084 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.14■□□□□ 0.97
HADHBP55084 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
HADHBP55084 AC009237.14-201ENST00000609975 1594 ntBASIC21.14■□□□□ 0.97
HADHBP55084 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.14■□□□□ 0.97
HADHBP55084 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HADHBP55084 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
HADHBP55084 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.14■□□□□ 0.97
HADHBP55084 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HADHBP55084 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HADHBP55084 AC116562.4-201ENST00000641316 2276 ntBASIC21.13■□□□□ 0.97
HADHBP55084 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.13■□□□□ 0.97
HADHBP55084 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HADHBP55084 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
HADHBP55084 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HADHBP55084 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
HADHBP55084 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HADHBP55084 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HADHBP55084 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.13■□□□□ 0.97
HADHBP55084 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
HADHBP55084 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.13■□□□□ 0.97
HADHBP55084 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
HADHBP55084 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HADHBP55084 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.13■□□□□ 0.97
HADHBP55084 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
HADHBP55084 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HADHBP55084 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HADHBP55084 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.12■□□□□ 0.97
HADHBP55084 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
HADHBP55084 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
HADHBP55084 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
HADHBP55084 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.12■□□□□ 0.97
HADHBP55084 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HADHBP55084 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.12■□□□□ 0.97
HADHBP55084 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.12■□□□□ 0.97
HADHBP55084 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.12■□□□□ 0.97
HADHBP55084 MIR6821-201ENST00000617625 74 ntBASIC21.12■□□□□ 0.97
HADHBP55084 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HADHBP55084 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HADHBP55084 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HADHBP55084 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HADHBP55084 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.11■□□□□ 0.97
HADHBP55084 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HADHBP55084 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HADHBP55084 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HADHBP55084 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HADHBP55084 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HADHBP55084 MCRIP2P1-201ENST00000394346 511 ntBASIC21.11■□□□□ 0.97
HADHBP55084 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
HADHBP55084 RARRES2P4-201ENST00000514074 484 ntBASIC21.11■□□□□ 0.97
HADHBP55084 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HADHBP55084 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HADHBP55084 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.11■□□□□ 0.97
HADHBP55084 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
HADHBP55084 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HADHBP55084 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HADHBP55084 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HADHBP55084 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HADHBP55084 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.11■□□□□ 0.97
HADHBP55084 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.11■□□□□ 0.97
HADHBP55084 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HADHBP55084 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
HADHBP55084 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.1■□□□□ 0.97
HADHBP55084 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms