Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
GTF2A1P52655 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.77■□□□□ 0.76
GTF2A1P52655 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
GTF2A1P52655 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.77■□□□□ 0.76
GTF2A1P52655 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GTF2A1P52655 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.77■□□□□ 0.75
GTF2A1P52655 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
GTF2A1P52655 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
GTF2A1P52655 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.76■□□□□ 0.75
GTF2A1P52655 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.76■□□□□ 0.75
GTF2A1P52655 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GTF2A1P52655 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GTF2A1P52655 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GTF2A1P52655 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GTF2A1P52655 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GTF2A1P52655 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.76■□□□□ 0.75
GTF2A1P52655 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.76■□□□□ 0.75
GTF2A1P52655 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GTF2A1P52655 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
GTF2A1P52655 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GTF2A1P52655 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GTF2A1P52655 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.76■□□□□ 0.75
GTF2A1P52655 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GTF2A1P52655 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.76■□□□□ 0.75
GTF2A1P52655 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GTF2A1P52655 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GTF2A1P52655 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GTF2A1P52655 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
GTF2A1P52655 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GTF2A1P52655 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.75■□□□□ 0.75
GTF2A1P52655 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
GTF2A1P52655 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GTF2A1P52655 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.75■□□□□ 0.75
GTF2A1P52655 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GTF2A1P52655 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
GTF2A1P52655 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.75■□□□□ 0.75
GTF2A1P52655 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.75■□□□□ 0.75
GTF2A1P52655 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
GTF2A1P52655 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
GTF2A1P52655 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.74■□□□□ 0.75
GTF2A1P52655 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.74■□□□□ 0.75
GTF2A1P52655 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
GTF2A1P52655 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.74■□□□□ 0.75
GTF2A1P52655 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
GTF2A1P52655 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
GTF2A1P52655 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GTF2A1P52655 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
GTF2A1P52655 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
GTF2A1P52655 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.74■□□□□ 0.75
GTF2A1P52655 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.74■□□□□ 0.75
GTF2A1P52655 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GTF2A1P52655 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
GTF2A1P52655 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.74■□□□□ 0.75
GTF2A1P52655 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
GTF2A1P52655 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
GTF2A1P52655 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
GTF2A1P52655 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.74■□□□□ 0.75
GTF2A1P52655 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.74■□□□□ 0.75
GTF2A1P52655 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.74■□□□□ 0.75
GTF2A1P52655 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GTF2A1P52655 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GTF2A1P52655 PLK5-205ENST00000642079 1969 ntBASIC19.74■□□□□ 0.75
GTF2A1P52655 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.73■□□□□ 0.75
GTF2A1P52655 AC068880.1-201ENST00000507289 2297 ntBASIC19.73■□□□□ 0.75
GTF2A1P52655 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GTF2A1P52655 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.73■□□□□ 0.75
GTF2A1P52655 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GTF2A1P52655 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.73■□□□□ 0.75
GTF2A1P52655 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.73■□□□□ 0.75
GTF2A1P52655 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
GTF2A1P52655 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GTF2A1P52655 AC135050.7-201ENST00000624508 2218 ntBASIC19.73■□□□□ 0.75
GTF2A1P52655 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.73■□□□□ 0.75
GTF2A1P52655 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GTF2A1P52655 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
GTF2A1P52655 AL513477.1-201ENST00000602865 2407 ntBASIC19.73■□□□□ 0.75
GTF2A1P52655 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GTF2A1P52655 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.73■□□□□ 0.75
GTF2A1P52655 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC19.73■□□□□ 0.75
GTF2A1P52655 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GTF2A1P52655 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GTF2A1P52655 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GTF2A1P52655 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GTF2A1P52655 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
GTF2A1P52655 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
GTF2A1P52655 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GTF2A1P52655 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GTF2A1P52655 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GTF2A1P52655 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.72■□□□□ 0.75
GTF2A1P52655 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.72■□□□□ 0.75
GTF2A1P52655 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
GTF2A1P52655 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
GTF2A1P52655 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GTF2A1P52655 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.72■□□□□ 0.75
GTF2A1P52655 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
GTF2A1P52655 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
GTF2A1P52655 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GTF2A1P52655 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.72■□□□□ 0.75
GTF2A1P52655 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.72■□□□□ 0.75
GTF2A1P52655 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms