Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC26.37■■□□□ 1.81
PRIM1P49642 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC26.37■■□□□ 1.81
PRIM1P49642 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC26.37■■□□□ 1.81
PRIM1P49642 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC26.37■■□□□ 1.81
PRIM1P49642 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC26.36■■□□□ 1.81
PRIM1P49642 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC26.36■■□□□ 1.81
PRIM1P49642 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PRIM1P49642 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PRIM1P49642 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
PRIM1P49642 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PRIM1P49642 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC26.36■■□□□ 1.81
PRIM1P49642 AP000525.1-201ENST00000608286 694 ntBASIC26.36■■□□□ 1.81
PRIM1P49642 DECR2-212ENST00000627716 352 ntTSL 2 BASIC26.36■■□□□ 1.81
PRIM1P49642 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
PRIM1P49642 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
PRIM1P49642 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PRIM1P49642 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC26.35■■□□□ 1.81
PRIM1P49642 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PRIM1P49642 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC26.35■■□□□ 1.81
PRIM1P49642 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC26.35■■□□□ 1.81
PRIM1P49642 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC26.35■■□□□ 1.81
PRIM1P49642 REXO1L10P-201ENST00000615707 1290 ntBASIC26.35■■□□□ 1.81
PRIM1P49642 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC26.35■■□□□ 1.81
PRIM1P49642 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC26.35■■□□□ 1.81
PRIM1P49642 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC26.34■■□□□ 1.81
PRIM1P49642 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
PRIM1P49642 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PRIM1P49642 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PRIM1P49642 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC26.34■■□□□ 1.81
PRIM1P49642 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC26.34■■□□□ 1.81
PRIM1P49642 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PRIM1P49642 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PRIM1P49642 NUDT16P1-203ENST00000513809 620 ntBASIC26.34■■□□□ 1.81
PRIM1P49642 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC26.34■■□□□ 1.81
PRIM1P49642 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC26.34■■□□□ 1.81
PRIM1P49642 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC26.34■■□□□ 1.81
PRIM1P49642 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC26.34■■□□□ 1.81
PRIM1P49642 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC26.34■■□□□ 1.81
PRIM1P49642 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
PRIM1P49642 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PRIM1P49642 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PRIM1P49642 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
PRIM1P49642 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PRIM1P49642 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
PRIM1P49642 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC26.33■■□□□ 1.81
PRIM1P49642 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC26.33■■□□□ 1.81
PRIM1P49642 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC26.33■■□□□ 1.81
PRIM1P49642 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC26.33■■□□□ 1.81
PRIM1P49642 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
PRIM1P49642 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
PRIM1P49642 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PRIM1P49642 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PRIM1P49642 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
PRIM1P49642 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PRIM1P49642 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PRIM1P49642 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
PRIM1P49642 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC26.32■■□□□ 1.8
PRIM1P49642 TPM1-226ENST00000560959 925 ntTSL 2 BASIC26.32■■□□□ 1.8
PRIM1P49642 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PRIM1P49642 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC26.32■■□□□ 1.8
PRIM1P49642 TERT-206ENST00000508104 2486 ntTSL 5 BASIC26.32■■□□□ 1.8
PRIM1P49642 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
PRIM1P49642 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
PRIM1P49642 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
PRIM1P49642 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
PRIM1P49642 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC26.31■■□□□ 1.8
PRIM1P49642 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PRIM1P49642 MIR1238-201ENST00000408483 83 ntBASIC26.31■■□□□ 1.8
PRIM1P49642 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC26.31■■□□□ 1.8
PRIM1P49642 AC023632.3-201ENST00000521633 145 ntBASIC26.31■■□□□ 1.8
PRIM1P49642 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC26.31■■□□□ 1.8
PRIM1P49642 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC26.31■■□□□ 1.8
PRIM1P49642 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC26.31■■□□□ 1.8
PRIM1P49642 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PRIM1P49642 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC26.31■■□□□ 1.8
PRIM1P49642 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
PRIM1P49642 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PRIM1P49642 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PRIM1P49642 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PRIM1P49642 UNC93B2-201ENST00000285383 730 ntBASIC26.3■■□□□ 1.8
PRIM1P49642 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PRIM1P49642 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC26.3■■□□□ 1.8
PRIM1P49642 KRT18P57-201ENST00000443599 1254 ntBASIC26.3■■□□□ 1.8
PRIM1P49642 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC26.3■■□□□ 1.8
PRIM1P49642 GLDC-219ENST00000640208 420 ntTSL 2 BASIC26.3■■□□□ 1.8
PRIM1P49642 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PRIM1P49642 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PRIM1P49642 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
PRIM1P49642 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PRIM1P49642 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PRIM1P49642 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PRIM1P49642 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PRIM1P49642 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
PRIM1P49642 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PRIM1P49642 PALM-207ENST00000590161 2137 ntTSL 4 BASIC26.29■■□□□ 1.8
PRIM1P49642 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC26.29■■□□□ 1.8
PRIM1P49642 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC26.29■■□□□ 1.8
PRIM1P49642 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
PRIM1P49642 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC26.29■■□□□ 1.8
PRIM1P49642 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC26.29■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms