Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX5P45973 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CBX5P45973 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX5P45973 IGHV3-19-201ENST00000521488 291 ntBASIC17.3■□□□□ 0.36
CBX5P45973 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.3■□□□□ 0.36
CBX5P45973 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.3■□□□□ 0.36
CBX5P45973 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.3■□□□□ 0.36
CBX5P45973 AC053503.5-201ENST00000601508 636 ntBASIC17.3■□□□□ 0.36
CBX5P45973 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.3■□□□□ 0.36
CBX5P45973 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.3■□□□□ 0.36
CBX5P45973 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX5P45973 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CBX5P45973 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX5P45973 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CBX5P45973 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX5P45973 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.3■□□□□ 0.36
CBX5P45973 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CBX5P45973 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX5P45973 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX5P45973 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CBX5P45973 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CBX5P45973 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.3■□□□□ 0.36
CBX5P45973 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CBX5P45973 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX5P45973 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CBX5P45973 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX5P45973 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CBX5P45973 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CBX5P45973 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CBX5P45973 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CBX5P45973 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CBX5P45973 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CBX5P45973 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.29■□□□□ 0.36
CBX5P45973 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CBX5P45973 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
CBX5P45973 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CBX5P45973 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.29■□□□□ 0.36
CBX5P45973 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CBX5P45973 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CBX5P45973 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CBX5P45973 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CBX5P45973 BX323043.1-201ENST00000641006 1765 ntBASIC17.29■□□□□ 0.36
CBX5P45973 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CBX5P45973 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.29■□□□□ 0.36
CBX5P45973 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CBX5P45973 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CBX5P45973 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CBX5P45973 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CBX5P45973 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX5P45973 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CBX5P45973 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CBX5P45973 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX5P45973 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.28■□□□□ 0.36
CBX5P45973 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CBX5P45973 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX5P45973 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CBX5P45973 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CBX5P45973 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX5P45973 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CBX5P45973 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.28■□□□□ 0.36
CBX5P45973 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC17.28■□□□□ 0.36
CBX5P45973 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CBX5P45973 AC126544.1-201ENST00000580842 1059 ntBASIC17.28■□□□□ 0.36
CBX5P45973 AC233992.3-201ENST00000607491 485 ntBASIC17.28■□□□□ 0.36
CBX5P45973 AL035685.1-201ENST00000636663 812 ntBASIC17.28■□□□□ 0.36
CBX5P45973 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX5P45973 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CBX5P45973 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CBX5P45973 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX5P45973 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.28■□□□□ 0.36
CBX5P45973 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.28■□□□□ 0.36
CBX5P45973 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX5P45973 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.28■□□□□ 0.36
CBX5P45973 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX5P45973 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX5P45973 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CBX5P45973 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX5P45973 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.28■□□□□ 0.36
CBX5P45973 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CBX5P45973 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.27■□□□□ 0.36
CBX5P45973 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CBX5P45973 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CBX5P45973 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CBX5P45973 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CBX5P45973 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CBX5P45973 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CBX5P45973 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.27■□□□□ 0.36
CBX5P45973 NOC2LP1-202ENST00000452600 2235 ntBASIC17.27■□□□□ 0.36
CBX5P45973 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CBX5P45973 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CBX5P45973 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CBX5P45973 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.27■□□□□ 0.36
CBX5P45973 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CBX5P45973 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.27■□□□□ 0.36
CBX5P45973 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.27■□□□□ 0.36
CBX5P45973 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.27■□□□□ 0.36
CBX5P45973 EEF1DP3-203ENST00000566025 782 ntBASIC17.27■□□□□ 0.36
CBX5P45973 MIR4466-201ENST00000606121 54 ntBASIC17.27■□□□□ 0.36
CBX5P45973 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CBX5P45973 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms