Protein–RNA interactions for Protein: P38272

SHE3, SWI5-dependent HO expression protein 3, yeastyeast

Known RBP Predictions only

Length 425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHE3P38272 SKI3YPR189W 4299 nt1.43□□□□□ -2.18
SHE3P38272 PCF11YDR228C 1881 nt1.43□□□□□ -2.18
SHE3P38272 LAA1YJL207C 6045 nt1.42□□□□□ -2.18
SHE3P38272 SWI5YDR146C 2130 nt1.42□□□□□ -2.18
SHE3P38272 SPC110YDR356W 2835 nt1.42□□□□□ -2.18
SHE3P38272 YDL011CYDL011C 324 nt1.42□□□□□ -2.18
SHE3P38272 SRP14YDL092W 441 nt1.42□□□□□ -2.18
SHE3P38272 YDR008CYDR008C 351 nt1.42□□□□□ -2.18
SHE3P38272 YAP6YDR259C 1152 nt1.42□□□□□ -2.18
SHE3P38272 YPL182CYPL182C 384 nt1.42□□□□□ -2.18
SHE3P38272 YBR174CYBR174C 315 nt1.42□□□□□ -2.18
SHE3P38272 TUS1YLR425W 3924 nt1.42□□□□□ -2.18
SHE3P38272 PIK1YNL267W 3201 nt1.41□□□□□ -2.18
SHE3P38272 YER088C-AYER088C-A 324 nt1.41□□□□□ -2.18
SHE3P38272 TIM13YGR181W 318 nt1.41□□□□□ -2.18
SHE3P38272 SPO24YPR036W-A 204 nt1.41□□□□□ -2.18
SHE3P38272 PIP2YOR363C 2991 nt1.41□□□□□ -2.18
SHE3P38272 IRE1YHR079C 3348 nt1.4□□□□□ -2.18
SHE3P38272 YJL020W-AYJL020W-A 258 nt1.4□□□□□ -2.19
SHE3P38272 YAL068W-AYAL068W-A 255 nt1.4□□□□□ -2.19
SHE3P38272 BSC3YLR465C 309 nt1.4□□□□□ -2.19
SHE3P38272 YML003WYML003W 873 nt1.4□□□□□ -2.19
SHE3P38272 ISF1YMR081C 1017 nt1.4□□□□□ -2.19
SHE3P38272 CDC25YLR310C 4770 nt1.4□□□□□ -2.19
SHE3P38272 YGR250CYGR250C 2346 nt1.4□□□□□ -2.19
SHE3P38272 HDA3YPR179C 1968 nt1.39□□□□□ -2.19
SHE3P38272 NOP53YPL146C 1368 nt1.39□□□□□ -2.19
SHE3P38272 SXM1YDR395W 2835 nt1.39□□□□□ -2.19
SHE3P38272 YKL083WYKL083W 615 nt1.39□□□□□ -2.19
SHE3P38272 YMR141W-AYMR141W-A 225 nt1.39□□□□□ -2.19
SHE3P38272 RPL9BYNL067W 576 nt1.39□□□□□ -2.19
SHE3P38272 PXA2YKL188C 2562 nt1.38□□□□□ -2.19
SHE3P38272 IML1YJR138W 4755 nt1.38□□□□□ -2.19
SHE3P38272 YDR003W-AYDR003W-A 123 nt1.38□□□□□ -2.19
SHE3P38272 ATG31YDR022C 591 nt1.38□□□□□ -2.19
SHE3P38272 YLR334CYLR334C 381 nt1.38□□□□□ -2.19
SHE3P38272 YPR170W-AYPR170W-A 186 nt1.38□□□□□ -2.19
SHE3P38272 RLM1YPL089C 2031 nt1.38□□□□□ -2.19
SHE3P38272 PET127YOR017W 2403 nt1.38□□□□□ -2.19
SHE3P38272 SEC63YOR254C 1992 nt1.38□□□□□ -2.19
SHE3P38272 HMRA1YCR097W 381 nt1.37□□□□□ -2.19
SHE3P38272 YHL041WYHL041W 450 nt1.37□□□□□ -2.19
SHE3P38272 TRX1YLR043C 312 nt1.37□□□□□ -2.19
SHE3P38272 FMP23YBR047W 528 nt1.37□□□□□ -2.19
SHE3P38272 POL5YEL055C 3069 nt1.37□□□□□ -2.19
SHE3P38272 CYC7YEL039C 342 nt1.36□□□□□ -2.19
SHE3P38272 ABM1YJR108W 372 nt1.36□□□□□ -2.19
SHE3P38272 RPS27AYKL156W 249 nt1.36□□□□□ -2.19
SHE3P38272 YPL261CYPL261C 309 nt1.36□□□□□ -2.19
SHE3P38272 FRK1YPL141C 2598 nt1.36□□□□□ -2.19
SHE3P38272 MAD1YGL086W 2250 nt1.36□□□□□ -2.19
SHE3P38272 ZRG17YNR039C 1818 nt1.36□□□□□ -2.19
SHE3P38272 FYV8YGR196C 2454 nt1.35□□□□□ -2.19
SHE3P38272 KCS1YDR017C 3153 nt1.35□□□□□ -2.19
SHE3P38272 YOP1YPR028W 543 nt1.35□□□□□ -2.19
SHE3P38272 CTR9YOL145C 3234 nt1.35□□□□□ -2.19
SHE3P38272 AIM9YER080W 1884 nt1.35□□□□□ -2.19
SHE3P38272 HKR1YDR420W 5409 nt1.34□□□□□ -2.19
SHE3P38272 tQ(UUG)E2tQ(UUG)E2 72 nt1.34□□□□□ -2.19
SHE3P38272 tV(UAC)BtV(UAC)B 74 nt1.34□□□□□ -2.19
SHE3P38272 tV(UAC)DtV(UAC)D 74 nt1.34□□□□□ -2.19
SHE3P38272 HIT1YJR055W 495 nt1.34□□□□□ -2.19
SHE3P38272 YLR146W-AYLR146W-A 189 nt1.34□□□□□ -2.19
SHE3P38272 YOR121CYOR121C 306 nt1.34□□□□□ -2.19
SHE3P38272 LYS14YDR034C 2373 nt1.33□□□□□ -2.2
SHE3P38272 SPO75YLL005C 2607 nt1.33□□□□□ -2.2
SHE3P38272 YGR265WYGR265W 411 nt1.33□□□□□ -2.2
SHE3P38272 YPR012WYPR012W 255 nt1.33□□□□□ -2.2
SHE3P38272 MSH5YDL154W 2706 nt1.32□□□□□ -2.2
SHE3P38272 PAC1YOR269W 1485 nt1.32□□□□□ -2.2
SHE3P38272 YDR169C-AYDR169C-A 150 nt1.32□□□□□ -2.2
SHE3P38272 UPS1YLR193C 528 nt1.32□□□□□ -2.2
SHE3P38272 YBL073WYBL073W 312 nt1.32□□□□□ -2.2
SHE3P38272 HHT1YBR010W 411 nt1.32□□□□□ -2.2
SHE3P38272 YPL229WYPL229W 621 nt1.32□□□□□ -2.2
SHE3P38272 MAK10YEL053C 2202 nt1.32□□□□□ -2.2
SHE3P38272 ZIP1YDR285W 2628 nt1.32□□□□□ -2.2
SHE3P38272 IRR1YIL026C 3453 nt1.31□□□□□ -2.2
SHE3P38272 snR56snR56 88 nt1.31□□□□□ -2.2
SHE3P38272 RTR1YER139C 681 nt1.31□□□□□ -2.2
SHE3P38272 YGR174W-AYGR174W-A 87 nt1.31□□□□□ -2.2
SHE3P38272 ADR1YDR216W 3972 nt1.31□□□□□ -2.2
SHE3P38272 SWI6YLR182W 2412 nt1.3□□□□□ -2.2
SHE3P38272 SMC4YLR086W 4257 nt1.3□□□□□ -2.2
SHE3P38272 HMI1YOL095C 2121 nt1.3□□□□□ -2.2
SHE3P38272 tW(UCA)QtW(UCA)Q 74 nt1.3□□□□□ -2.2
SHE3P38272 IRC23YOR044W 474 nt1.3□□□□□ -2.2
SHE3P38272 EFR3YMR212C 2349 nt1.3□□□□□ -2.2
SHE3P38272 MDS3YGL197W 4464 nt1.3□□□□□ -2.2
SHE3P38272 MVP1YMR004W 1536 nt1.3□□□□□ -2.2
SHE3P38272 SEC21YNL287W 2808 nt1.3□□□□□ -2.2
SHE3P38272 GIM4YEL003W 336 nt1.29□□□□□ -2.2
SHE3P38272 YIL059CYIL059C 366 nt1.29□□□□□ -2.2
SHE3P38272 SAC3YDR159W 3906 nt1.28□□□□□ -2.2
SHE3P38272 RFX1YLR176C 2436 nt1.28□□□□□ -2.2
SHE3P38272 PAU2YEL049W 363 nt1.28□□□□□ -2.2
SHE3P38272 STF2YGR008C 255 nt1.28□□□□□ -2.2
SHE3P38272 YHR175W-AYHR175W-A 150 nt1.28□□□□□ -2.2
SHE3P38272 YJL135WYJL135W 318 nt1.28□□□□□ -2.2
SHE3P38272 MRPL31YKL138C 396 nt1.28□□□□□ -2.2
Retrieved 100 of 7,029 protein–RNA pairs in 28.1 ms