Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LSP1P33241 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LSP1P33241 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.22■□□□□ 0.83
LSP1P33241 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LSP1P33241 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LSP1P33241 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
LSP1P33241 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LSP1P33241 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LSP1P33241 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
LSP1P33241 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
LSP1P33241 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.22■□□□□ 0.83
LSP1P33241 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LSP1P33241 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LSP1P33241 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LSP1P33241 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LSP1P33241 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LSP1P33241 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
LSP1P33241 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LSP1P33241 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
LSP1P33241 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LSP1P33241 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
LSP1P33241 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.21■□□□□ 0.83
LSP1P33241 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LSP1P33241 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
LSP1P33241 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LSP1P33241 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.21■□□□□ 0.83
LSP1P33241 KRT125P-201ENST00000546827 989 ntBASIC20.21■□□□□ 0.83
LSP1P33241 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
LSP1P33241 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.21■□□□□ 0.83
LSP1P33241 AC099791.2-201ENST00000605725 427 ntBASIC20.21■□□□□ 0.83
LSP1P33241 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LSP1P33241 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
LSP1P33241 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LSP1P33241 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
LSP1P33241 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LSP1P33241 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LSP1P33241 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.21■□□□□ 0.83
LSP1P33241 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LSP1P33241 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
LSP1P33241 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
LSP1P33241 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.21■□□□□ 0.83
LSP1P33241 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LSP1P33241 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.83
LSP1P33241 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.83
LSP1P33241 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
LSP1P33241 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LSP1P33241 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.2■□□□□ 0.82
LSP1P33241 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.2■□□□□ 0.82
LSP1P33241 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LSP1P33241 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
LSP1P33241 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.2■□□□□ 0.82
LSP1P33241 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.2■□□□□ 0.82
LSP1P33241 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LSP1P33241 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LSP1P33241 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.2■□□□□ 0.82
LSP1P33241 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LSP1P33241 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.2■□□□□ 0.82
LSP1P33241 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LSP1P33241 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LSP1P33241 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.2■□□□□ 0.82
LSP1P33241 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LSP1P33241 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LSP1P33241 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LSP1P33241 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
LSP1P33241 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.2■□□□□ 0.82
LSP1P33241 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
LSP1P33241 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LSP1P33241 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LSP1P33241 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.2■□□□□ 0.82
LSP1P33241 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.19■□□□□ 0.82
LSP1P33241 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LSP1P33241 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LSP1P33241 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
LSP1P33241 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
LSP1P33241 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.19■□□□□ 0.82
LSP1P33241 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
LSP1P33241 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LSP1P33241 AC009299.2-201ENST00000482477 511 ntBASIC20.19■□□□□ 0.82
LSP1P33241 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LSP1P33241 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LSP1P33241 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
LSP1P33241 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LSP1P33241 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LSP1P33241 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LSP1P33241 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
LSP1P33241 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LSP1P33241 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
LSP1P33241 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LSP1P33241 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
LSP1P33241 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LSP1P33241 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.19■□□□□ 0.82
LSP1P33241 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
LSP1P33241 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LSP1P33241 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
LSP1P33241 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LSP1P33241 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.18■□□□□ 0.82
LSP1P33241 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.18■□□□□ 0.82
LSP1P33241 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LSP1P33241 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LSP1P33241 AL032819.2-201ENST00000624543 2162 ntBASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms