Protein–RNA interactions for Protein: P28070

PSMB4, Proteasome subunit beta type-4, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4P28070 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PSMB4P28070 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PSMB4P28070 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PSMB4P28070 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.55■□□□□ 0.88
PSMB4P28070 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PSMB4P28070 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PSMB4P28070 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.55■□□□□ 0.88
PSMB4P28070 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PSMB4P28070 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PSMB4P28070 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.55■□□□□ 0.88
PSMB4P28070 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
PSMB4P28070 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.55■□□□□ 0.88
PSMB4P28070 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.55■□□□□ 0.88
PSMB4P28070 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.55■□□□□ 0.88
PSMB4P28070 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.55■□□□□ 0.88
PSMB4P28070 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PSMB4P28070 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
PSMB4P28070 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PSMB4P28070 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.55■□□□□ 0.88
PSMB4P28070 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PSMB4P28070 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.55■□□□□ 0.88
PSMB4P28070 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.55■□□□□ 0.88
PSMB4P28070 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PSMB4P28070 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.55■□□□□ 0.88
PSMB4P28070 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.54■□□□□ 0.88
PSMB4P28070 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
PSMB4P28070 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.54■□□□□ 0.88
PSMB4P28070 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PSMB4P28070 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PSMB4P28070 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.54■□□□□ 0.88
PSMB4P28070 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PSMB4P28070 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PSMB4P28070 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PSMB4P28070 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PSMB4P28070 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PSMB4P28070 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PSMB4P28070 AL355472.2-201ENST00000422958 438 ntBASIC20.54■□□□□ 0.88
PSMB4P28070 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.54■□□□□ 0.88
PSMB4P28070 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PSMB4P28070 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.54■□□□□ 0.88
PSMB4P28070 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
PSMB4P28070 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.54■□□□□ 0.88
PSMB4P28070 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.54■□□□□ 0.88
PSMB4P28070 AC008694.1-202ENST00000636953 945 ntBASIC20.54■□□□□ 0.88
PSMB4P28070 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PSMB4P28070 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PSMB4P28070 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PSMB4P28070 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
PSMB4P28070 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PSMB4P28070 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PSMB4P28070 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PSMB4P28070 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PSMB4P28070 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PSMB4P28070 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PSMB4P28070 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PSMB4P28070 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.53■□□□□ 0.88
PSMB4P28070 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PSMB4P28070 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.53■□□□□ 0.88
PSMB4P28070 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.53■□□□□ 0.88
PSMB4P28070 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.53■□□□□ 0.88
PSMB4P28070 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.53■□□□□ 0.88
PSMB4P28070 AC080038.1-201ENST00000611274 1154 ntBASIC20.53■□□□□ 0.88
PSMB4P28070 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
PSMB4P28070 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PSMB4P28070 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PSMB4P28070 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.53■□□□□ 0.88
PSMB4P28070 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PSMB4P28070 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PSMB4P28070 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PSMB4P28070 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PSMB4P28070 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
PSMB4P28070 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PSMB4P28070 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.52■□□□□ 0.88
PSMB4P28070 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
PSMB4P28070 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PSMB4P28070 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PSMB4P28070 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.52■□□□□ 0.88
PSMB4P28070 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PSMB4P28070 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PSMB4P28070 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.52■□□□□ 0.88
PSMB4P28070 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.52■□□□□ 0.88
PSMB4P28070 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.52■□□□□ 0.88
PSMB4P28070 CYP2T3P-201ENST00000601990 817 ntBASIC20.52■□□□□ 0.88
PSMB4P28070 AC005181.1-201ENST00000604782 1256 ntBASIC20.52■□□□□ 0.88
PSMB4P28070 AC105020.6-201ENST00000621523 1217 ntBASIC20.52■□□□□ 0.88
PSMB4P28070 AC073111.5-205ENST00000641717 521 ntBASIC20.52■□□□□ 0.88
PSMB4P28070 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.52■□□□□ 0.88
PSMB4P28070 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.52■□□□□ 0.88
PSMB4P28070 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PSMB4P28070 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PSMB4P28070 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PSMB4P28070 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PSMB4P28070 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PSMB4P28070 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PSMB4P28070 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.51■□□□□ 0.87
PSMB4P28070 KRT18P68-201ENST00000392293 1000 ntBASIC20.51■□□□□ 0.87
PSMB4P28070 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.51■□□□□ 0.87
PSMB4P28070 AC093787.1-201ENST00000450396 207 ntBASIC20.51■□□□□ 0.87
PSMB4P28070 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PSMB4P28070 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms