Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP24386 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP24386 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP24386 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP24386 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CHMP24386 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.82■□□□□ 0.6
CHMP24386 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP24386 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP24386 AC068338.2-201ENST00000563278 1430 ntBASIC18.82■□□□□ 0.6
CHMP24386 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.82■□□□□ 0.6
CHMP24386 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CHMP24386 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP24386 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP24386 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.81■□□□□ 0.6
CHMP24386 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP24386 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP24386 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP24386 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP24386 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP24386 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.81■□□□□ 0.6
CHMP24386 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.81■□□□□ 0.6
CHMP24386 AL591742.1-201ENST00000604433 565 ntBASIC18.81■□□□□ 0.6
CHMP24386 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.81■□□□□ 0.6
CHMP24386 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP24386 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CHMP24386 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.81■□□□□ 0.6
CHMP24386 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP24386 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.81■□□□□ 0.6
CHMP24386 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.81■□□□□ 0.6
CHMP24386 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CHMP24386 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP24386 AC011484.1-201ENST00000377652 1995 ntBASIC18.81■□□□□ 0.6
CHMP24386 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CHMP24386 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP24386 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP24386 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP24386 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.8■□□□□ 0.6
CHMP24386 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP24386 AL121832.2-201ENST00000610979 668 ntBASIC18.8■□□□□ 0.6
CHMP24386 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP24386 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP24386 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP24386 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.8■□□□□ 0.6
CHMP24386 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP24386 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP24386 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP24386 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP24386 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP24386 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP24386 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.79■□□□□ 0.6
CHMP24386 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.79■□□□□ 0.6
CHMP24386 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.79■□□□□ 0.6
CHMP24386 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP24386 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP24386 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP24386 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CHMP24386 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.79■□□□□ 0.6
CHMP24386 GPX1P1-201ENST00000388829 606 ntBASIC18.79■□□□□ 0.6
CHMP24386 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
CHMP24386 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CHMP24386 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.79■□□□□ 0.6
CHMP24386 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP24386 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.79■□□□□ 0.6
CHMP24386 AC133552.2-202ENST00000575694 574 ntBASIC18.79■□□□□ 0.6
CHMP24386 AL050303.2-201ENST00000619798 666 ntBASIC18.79■□□□□ 0.6
CHMP24386 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.79■□□□□ 0.6
CHMP24386 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.79■□□□□ 0.6
CHMP24386 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP24386 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.79■□□□□ 0.6
CHMP24386 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CHMP24386 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CHMP24386 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CHMP24386 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CHMP24386 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP24386 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.78■□□□□ 0.6
CHMP24386 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CHMP24386 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP24386 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP24386 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP24386 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CHMP24386 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP24386 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP24386 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP24386 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP24386 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.78■□□□□ 0.6
CHMP24386 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.78■□□□□ 0.6
CHMP24386 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.78■□□□□ 0.6
CHMP24386 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP24386 AL109923.1-201ENST00000618799 583 ntBASIC18.78■□□□□ 0.6
CHMP24386 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.78■□□□□ 0.6
CHMP24386 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CHMP24386 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP24386 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP24386 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.77■□□□□ 0.6
CHMP24386 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP24386 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP24386 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP24386 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP24386 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP24386 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms