Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 ATIC-202ENST00000413174 695 ntTSL 58.57□□□□□ -1.043e-7■■■■□ 24
RPS3P23396 COPB1-203ENST00000525214 566 ntTSL 21.08□□□□□ -2.247e-8■■■■□ 24
RPS3P23396 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.633e-7■■■■□ 24
RPS3P23396 VWA1-202ENST00000471398 458 ntTSL 316.84■□□□□ 0.297e-9■■■■□ 24
RPS3P23396 FH-203ENST00000497042 351 ntTSL 2-0.06□□□□□ -2.429e-9■■■■□ 24
RPS3P23396 PCSK9-201ENST00000302118 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.535e-13■■■■□ 24
RPS3P23396 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.947e-7■■■■□ 24
RPS3P23396 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.937e-7■■■■□ 24
RPS3P23396 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.87■□□□□ 0.297e-7■■■■□ 24
RPS3P23396 EIF6-206ENST00000447927 932 ntTSL 1 (best)15.85■□□□□ 0.137e-7■■■■□ 24
RPS3P23396 EIF6-205ENST00000440766 798 ntTSL 215.85■□□□□ 0.137e-7■■■■□ 24
RPS3P23396 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 07e-7■■■■□ 24
RPS3P23396 HSPA8-219ENST00000532780 1194 ntTSL 217.66■□□□□ 0.422e-10■■■■□ 24
RPS3P23396 PHC2-206ENST00000467894 1466 ntTSL 522.64■■□□□ 1.217e-7■■■■□ 24
RPS3P23396 PHC2-210ENST00000485928 2548 ntTSL 222.07■■□□□ 1.127e-7■■■■□ 24
RPS3P23396 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.127e-7■■■■□ 24
RPS3P23396 PHC2-201ENST00000257118 3870 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.457e-7■■■■□ 24
RPS3P23396 PHC2-203ENST00000373422 2799 ntTSL 2 BASIC11.69□□□□□ -0.547e-7■■■■□ 24
RPS3P23396 PHC2-204ENST00000431992 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.657e-7■■■■□ 24
RPS3P23396 P4HB-205ENST00000467086 785 ntTSL 522.96■■□□□ 1.271e-20■■■■□ 24
RPS3P23396 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.265e-8■■■■□ 24
RPS3P23396 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.095e-8■■■■□ 24
RPS3P23396 CD63-215ENST00000552754 682 ntTSL 1 (best) BASIC11.49□□□□□ -0.575e-8■■■■□ 24
RPS3P23396 RPL9-210ENST00000511643 618 ntTSL 23.08□□□□□ -1.925e-14■■■■□ 24
RPS3P23396 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.212e-6■■■■□ 24
RPS3P23396 AC010997.3-201ENST00000418818 502 ntTSL 3 BASIC12.04□□□□□ -0.482e-6■■■■□ 24
RPS3P23396 LDHB-208ENST00000539782 487 ntTSL 36.8□□□□□ -1.321e-9■■■■□ 24
RPS3P23396 TPP1-210ENST00000528807 585 ntTSL 218.37■□□□□ 0.536e-10■■■■□ 24
RPS3P23396 CLSTN3-210ENST00000540931 910 ntTSL 217.29■□□□□ 0.365e-7■■■■□ 23.9
RPS3P23396 ST6GAL1-213ENST00000448449 1055 ntTSL 57.28□□□□□ -1.241e-6■■■■□ 23.9
RPS3P23396 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.171e-10■■■■□ 23.9
RPS3P23396 SIAH2-202ENST00000472885 452 ntTSL 416.77■□□□□ 0.281e-10■■■■□ 23.9
RPS3P23396 SIAH2-203ENST00000482706 427 ntTSL 315.22■□□□□ 0.031e-10■■■■□ 23.9
RPS3P23396 ACY1-202ENST00000464587 538 ntTSL 315.74■□□□□ 0.111e-6■■■■□ 23.9
RPS3P23396 EML2-227ENST00000592433 705 ntTSL 214.93□□□□□ -0.021e-6■■■■□ 23.9
RPS3P23396 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.97■□□□□ 0.319e-7■■■■□ 23.9
RPS3P23396 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.06■□□□□ 0.169e-7■■■■□ 23.9
RPS3P23396 CCNB1-204ENST00000506572 1331 ntTSL 1 (best)14.9□□□□□ -0.021e-6■■■■□ 23.9
RPS3P23396 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.081e-6■■■■□ 23.9
RPS3P23396 HMOX1-204ENST00000494998 567 ntTSL 210.45□□□□□ -0.742e-11■■■■□ 23.9
RPS3P23396 PSMD8-203ENST00000590331 422 ntTSL 28.13□□□□□ -1.112e-11■■■■□ 23.9
RPS3P23396 CCNB1-203ENST00000505500 1190 ntTSL 1 (best)7.13□□□□□ -1.277e-7■■■■□ 23.9
RPS3P23396 PA2G4-204ENST00000552266 779 ntTSL 26.89□□□□□ -1.319e-7■■■■□ 23.9
RPS3P23396 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.022e-13■■■■□ 23.9
RPS3P23396 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.331e-7■■■■□ 23.9
RPS3P23396 EMC1-213ENST00000641089 570 nt13.51□□□□□ -0.254e-17■■■■□ 23.9
RPS3P23396 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.273e-6■■■■□ 23.9
RPS3P23396 MAN2B1-201ENST00000221363 3170 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.453e-6■■■■□ 23.9
RPS3P23396 MAN2B1-206ENST00000466794 3685 ntTSL 211.5□□□□□ -0.573e-6■■■■□ 23.9
RPS3P23396 VASP-208ENST00000589627 696 ntTSL 322.84■■□□□ 1.251e-9■■■■□ 23.9
RPS3P23396 CTSH-216ENST00000534268 622 ntTSL 518.21■□□□□ 0.517e-9■■■■□ 23.9
RPS3P23396 CTSH-206ENST00000528436 268 ntTSL 317.56■□□□□ 0.47e-9■■■■□ 23.9
RPS3P23396 GARS-208ENST00000485784 761 ntTSL 28.72□□□□□ -1.019e-7■■■■□ 23.9
RPS3P23396 SLC39A1-208ENST00000461071 529 ntTSL 316.52■□□□□ 0.244e-8■■■■□ 23.9
RPS3P23396 MDH1-202ENST00000409476 808 ntTSL 5 BASIC10.53□□□□□ -0.723e-7■■■■□ 23.9
RPS3P23396 MDH1-203ENST00000409908 700 ntTSL 3 BASIC10.53□□□□□ -0.723e-7■■■■□ 23.9
RPS3P23396 MDH1-216ENST00000544381 1346 ntTSL 2 BASIC9.92□□□□□ -0.823e-7■■■■□ 23.9
RPS3P23396 MDH1-201ENST00000233114 1650 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.843e-7■■■■□ 23.9
RPS3P23396 MDH1-215ENST00000539945 1443 ntTSL 2 BASIC9.59□□□□□ -0.873e-7■■■■□ 23.9
RPS3P23396 PTTG1-207ENST00000524244 434 ntTSL 27.52□□□□□ -1.212e-7■■■■□ 23.9
RPS3P23396 AC135050.2-201ENST00000533518 2362 ntTSL 1 (best)15.08■□□□□ 02e-9■■■■□ 23.9
RPS3P23396 ATP5C1-207ENST00000472202 782 ntTSL 23.16□□□□□ -1.93e-8■■■■□ 23.9
RPS3P23396 UROD-213ENST00000473012 632 ntTSL 312.09□□□□□ -0.476e-10■■■■□ 23.8
RPS3P23396 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.4■□□□□ 0.862e-9■■■■□ 23.8
RPS3P23396 COX4I1-211ENST00000566405 490 ntTSL 511.8□□□□□ -0.522e-9■■■■□ 23.8
RPS3P23396 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.141e-6■■■■□ 23.8
RPS3P23396 HMBS-218ENST00000543821 562 ntTSL 412.32□□□□□ -0.448e-7■■■■□ 23.8
RPS3P23396 ANAPC11-222ENST00000585259 345 ntTSL 515.09■□□□□ 0.016e-8■■■■□ 23.8
RPS3P23396 ASNS-210ENST00000448127 579 ntTSL 29.08□□□□□ -0.964e-8■■■■□ 23.8
RPS3P23396 NDRG1-208ENST00000518094 347 ntTSL 27.41□□□□□ -1.223e-7■■■■□ 23.8
RPS3P23396 HYOU1-215ENST00000543287 2464 ntTSL 216.97■□□□□ 0.311e-7■■■■□ 23.8
RPS3P23396 CD164-209ENST00000512212 590 ntTSL 213.98□□□□□ -0.175e-13■■■■□ 23.8
RPS3P23396 CD164-210ENST00000512821 964 ntTSL 2 BASIC13.98□□□□□ -0.175e-13■■■■□ 23.8
RPS3P23396 CD164-204ENST00000413644 2414 ntTSL 1 (best) BASIC11.87□□□□□ -0.515e-13■■■■□ 23.8
RPS3P23396 CD164-202ENST00000310786 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.825e-13■■■■□ 23.8
RPS3P23396 CD164-203ENST00000324953 2936 ntTSL 1 (best) BASIC9.22□□□□□ -0.935e-13■■■■□ 23.8
RPS3P23396 CD164-201ENST00000275080 2954 ntTSL 1 (best) BASIC8.72□□□□□ -1.015e-13■■■■□ 23.8
RPS3P23396 TNFRSF10D-201ENST00000312584 3538 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.981e-6■■■■□ 23.8
RPS3P23396 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.231e-6■■■■□ 23.8
RPS3P23396 G3BP2-201ENST00000357854 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.561e-6■■■■□ 23.8
RPS3P23396 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC7.12□□□□□ -1.271e-6■■■■□ 23.8
RPS3P23396 ESYT1-207ENST00000550878 646 ntTSL 511.08□□□□□ -0.646e-7■■■■□ 23.8
RPS3P23396 TDP2-205ENST00000480495 714 ntTSL 1 (best)14.55□□□□□ -0.083e-6■■■■□ 23.8
RPS3P23396 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.054e-7■■■■□ 23.8
RPS3P23396 ATP5F1-205ENST00000483994 678 ntTSL 2 BASIC10.55□□□□□ -0.724e-7■■■■□ 23.8
RPS3P23396 ATP5F1-201ENST00000369721 1040 ntTSL 27.61□□□□□ -1.194e-7■■■■□ 23.8
RPS3P23396 ATP5F1-204ENST00000468818 859 ntTSL 34.25□□□□□ -1.734e-7■■■■□ 23.8
RPS3P23396 VWA1-204ENST00000495558 819 ntTSL 214.48□□□□□ -0.094e-9■■■■□ 23.8
RPS3P23396 AC024592.3-201ENST00000592091 2118 ntTSL 217.35■□□□□ 0.372e-8■■■■□ 23.8
RPS3P23396 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.292e-8■■■■□ 23.8
RPS3P23396 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.65■□□□□ 0.262e-8■■■■□ 23.8
RPS3P23396 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.11■□□□□ 0.172e-8■■■■□ 23.8
RPS3P23396 AC024592.3-203ENST00000585661 431 ntAPPRIS P1 TSL 216.11■□□□□ 0.172e-8■■■■□ 23.8
RPS3P23396 NDUFA11-206ENST00000593233 657 ntTSL 315.65■□□□□ 0.12e-8■■■■□ 23.8
RPS3P23396 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.19■□□□□ 0.022e-8■■■■□ 23.8
RPS3P23396 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.641e-6■■■■□ 23.8
RPS3P23396 SIVA1-205ENST00000553819 856 ntTSL 317.03■□□□□ 0.321e-6■■■■□ 23.8
RPS3P23396 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.41■□□□□ 0.061e-6■■■■□ 23.8
RPS3P23396 SIVA1-208ENST00000556431 4142 ntTSL 211.03□□□□□ -0.641e-6■■■■□ 23.8
RPS3P23396 CD63-203ENST00000546457 607 ntTSL 213.61□□□□□ -0.236e-12■■■■□ 23.8
Retrieved 100 of 24,271 protein–RNA pairs in 231.3 ms