Protein–RNA interactions for Protein: P10147

CCL3, C-C motif chemokine 3, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3P10147 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.4■□□□□ 0.54
CCL3P10147 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CCL3P10147 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCL3P10147 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCL3P10147 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.4■□□□□ 0.54
CCL3P10147 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCL3P10147 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.4■□□□□ 0.54
CCL3P10147 AC120498.8-201ENST00000614275 531 ntBASIC18.4■□□□□ 0.54
CCL3P10147 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CCL3P10147 PTBP1P-201ENST00000554374 1601 ntBASIC18.4■□□□□ 0.54
CCL3P10147 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.4■□□□□ 0.54
CCL3P10147 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.4■□□□□ 0.54
CCL3P10147 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCL3P10147 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCL3P10147 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.4■□□□□ 0.54
CCL3P10147 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCL3P10147 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CCL3P10147 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
CCL3P10147 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CCL3P10147 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCL3P10147 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.39■□□□□ 0.53
CCL3P10147 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.39■□□□□ 0.53
CCL3P10147 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.39■□□□□ 0.53
CCL3P10147 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
CCL3P10147 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCL3P10147 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.39■□□□□ 0.53
CCL3P10147 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CCL3P10147 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCL3P10147 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.39■□□□□ 0.53
CCL3P10147 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCL3P10147 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
CCL3P10147 GCSHP5-201ENST00000443090 522 ntBASIC18.39■□□□□ 0.53
CCL3P10147 RPS2P52-201ENST00000469610 820 ntBASIC18.39■□□□□ 0.53
CCL3P10147 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCL3P10147 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.39■□□□□ 0.53
CCL3P10147 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCL3P10147 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.39■□□□□ 0.53
CCL3P10147 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCL3P10147 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.39■□□□□ 0.53
CCL3P10147 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCL3P10147 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCL3P10147 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.39■□□□□ 0.53
CCL3P10147 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.39■□□□□ 0.53
CCL3P10147 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCL3P10147 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.39■□□□□ 0.53
CCL3P10147 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCL3P10147 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCL3P10147 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.39■□□□□ 0.53
CCL3P10147 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCL3P10147 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCL3P10147 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCL3P10147 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CCL3P10147 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCL3P10147 AL158047.1-201ENST00000445918 881 ntBASIC18.38■□□□□ 0.53
CCL3P10147 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.38■□□□□ 0.53
CCL3P10147 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CCL3P10147 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.38■□□□□ 0.53
CCL3P10147 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCL3P10147 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CCL3P10147 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCL3P10147 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.38■□□□□ 0.53
CCL3P10147 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCL3P10147 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.38■□□□□ 0.53
CCL3P10147 DPP3P2-201ENST00000416030 1696 ntBASIC18.38■□□□□ 0.53
CCL3P10147 AC092720.2-201ENST00000602388 1665 ntBASIC18.38■□□□□ 0.53
CCL3P10147 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCL3P10147 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CCL3P10147 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.37■□□□□ 0.53
CCL3P10147 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCL3P10147 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCL3P10147 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CCL3P10147 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CCL3P10147 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCL3P10147 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCL3P10147 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCL3P10147 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCL3P10147 AC142381.4-202ENST00000563973 229 ntBASIC18.37■□□□□ 0.53
CCL3P10147 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.37■□□□□ 0.53
CCL3P10147 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCL3P10147 AC066615.1-201ENST00000640911 628 ntBASIC18.37■□□□□ 0.53
CCL3P10147 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.37■□□□□ 0.53
CCL3P10147 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCL3P10147 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCL3P10147 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCL3P10147 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCL3P10147 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCL3P10147 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCL3P10147 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.37■□□□□ 0.53
CCL3P10147 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCL3P10147 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCL3P10147 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.36■□□□□ 0.53
CCL3P10147 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.36■□□□□ 0.53
CCL3P10147 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCL3P10147 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCL3P10147 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CCL3P10147 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.36■□□□□ 0.53
CCL3P10147 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCL3P10147 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CCL3P10147 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.36■□□□□ 0.53
CCL3P10147 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms