Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCNYL3P0C7X3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.42■□□□□ 0.7
CCNYL3P0C7X3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCNYL3P0C7X3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCNYL3P0C7X3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.42■□□□□ 0.7
CCNYL3P0C7X3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.42■□□□□ 0.7
CCNYL3P0C7X3 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CCNYL3P0C7X3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCNYL3P0C7X3 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.41■□□□□ 0.7
CCNYL3P0C7X3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
CCNYL3P0C7X3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNYL3P0C7X3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.41■□□□□ 0.7
CCNYL3P0C7X3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CCNYL3P0C7X3 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNYL3P0C7X3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.41■□□□□ 0.7
CCNYL3P0C7X3 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNYL3P0C7X3 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.41■□□□□ 0.7
CCNYL3P0C7X3 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.41■□□□□ 0.7
CCNYL3P0C7X3 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.41■□□□□ 0.7
CCNYL3P0C7X3 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.41■□□□□ 0.7
CCNYL3P0C7X3 AC105020.6-201ENST00000621523 1217 ntBASIC19.41■□□□□ 0.7
CCNYL3P0C7X3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNYL3P0C7X3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.41■□□□□ 0.7
CCNYL3P0C7X3 AL049796.1-201ENST00000565336 1766 ntBASIC19.41■□□□□ 0.7
CCNYL3P0C7X3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCNYL3P0C7X3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNYL3P0C7X3 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCNYL3P0C7X3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNYL3P0C7X3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCNYL3P0C7X3 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.4■□□□□ 0.7
CCNYL3P0C7X3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CCNYL3P0C7X3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNYL3P0C7X3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.4■□□□□ 0.7
CCNYL3P0C7X3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNYL3P0C7X3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNYL3P0C7X3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNYL3P0C7X3 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNYL3P0C7X3 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
CCNYL3P0C7X3 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.4■□□□□ 0.7
CCNYL3P0C7X3 PGM5P4-201ENST00000421970 445 ntBASIC19.4■□□□□ 0.7
CCNYL3P0C7X3 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.4■□□□□ 0.7
CCNYL3P0C7X3 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.4■□□□□ 0.7
CCNYL3P0C7X3 RPS2P4-201ENST00000476944 856 ntBASIC19.4■□□□□ 0.7
CCNYL3P0C7X3 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.4■□□□□ 0.7
CCNYL3P0C7X3 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CCNYL3P0C7X3 AC008403.3-201ENST00000598924 454 ntBASIC19.4■□□□□ 0.7
CCNYL3P0C7X3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.4■□□□□ 0.7
CCNYL3P0C7X3 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
CCNYL3P0C7X3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CCNYL3P0C7X3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.4■□□□□ 0.7
CCNYL3P0C7X3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNYL3P0C7X3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNYL3P0C7X3 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNYL3P0C7X3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNYL3P0C7X3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNYL3P0C7X3 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.39■□□□□ 0.7
CCNYL3P0C7X3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.39■□□□□ 0.7
CCNYL3P0C7X3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCNYL3P0C7X3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CCNYL3P0C7X3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCNYL3P0C7X3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CCNYL3P0C7X3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCNYL3P0C7X3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCNYL3P0C7X3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCNYL3P0C7X3 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCNYL3P0C7X3 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCNYL3P0C7X3 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCNYL3P0C7X3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.39■□□□□ 0.69
CCNYL3P0C7X3 UBE2SP1-201ENST00000450587 669 ntBASIC19.39■□□□□ 0.69
CCNYL3P0C7X3 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCNYL3P0C7X3 FAM197Y4-202ENST00000622692 608 ntBASIC19.39■□□□□ 0.69
CCNYL3P0C7X3 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CCNYL3P0C7X3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCNYL3P0C7X3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCNYL3P0C7X3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCNYL3P0C7X3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.39■□□□□ 0.69
CCNYL3P0C7X3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCNYL3P0C7X3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCNYL3P0C7X3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCNYL3P0C7X3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCNYL3P0C7X3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCNYL3P0C7X3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCNYL3P0C7X3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCNYL3P0C7X3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCNYL3P0C7X3 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCNYL3P0C7X3 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCNYL3P0C7X3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCNYL3P0C7X3 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCNYL3P0C7X3 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCNYL3P0C7X3 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCNYL3P0C7X3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CCNYL3P0C7X3 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CCNYL3P0C7X3 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.38■□□□□ 0.69
CCNYL3P0C7X3 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.38■□□□□ 0.69
CCNYL3P0C7X3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCNYL3P0C7X3 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCNYL3P0C7X3 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.38■□□□□ 0.69
CCNYL3P0C7X3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.38■□□□□ 0.69
CCNYL3P0C7X3 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.38■□□□□ 0.69
CCNYL3P0C7X3 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms