Protein–RNA interactions for Protein: P08519

LPA, Apolipoprotein(a), humanhuman

Predictions only

Length 4,548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPAP08519 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LPAP08519 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC11.21□□□□□ -0.61
LPAP08519 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC11.21□□□□□ -0.61
LPAP08519 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
LPAP08519 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
LPAP08519 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
LPAP08519 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LPAP08519 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LPAP08519 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LPAP08519 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
LPAP08519 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
LPAP08519 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
LPAP08519 STX5-203ENST00000394690 1568 ntTSL 5 BASIC11.21□□□□□ -0.62
LPAP08519 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LPAP08519 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LPAP08519 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
LPAP08519 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC11.21□□□□□ -0.62
LPAP08519 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC11.21□□□□□ -0.62
LPAP08519 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LPAP08519 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
LPAP08519 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
LPAP08519 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC11.21□□□□□ -0.62
LPAP08519 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC11.21□□□□□ -0.62
LPAP08519 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC11.21□□□□□ -0.62
LPAP08519 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LPAP08519 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LPAP08519 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC11.21□□□□□ -0.62
LPAP08519 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LPAP08519 EXOC3-AS1-202ENST00000623673 1663 ntBASIC11.2□□□□□ -0.62
LPAP08519 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LPAP08519 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC11.2□□□□□ -0.62
LPAP08519 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC11.2□□□□□ -0.62
LPAP08519 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC11.2□□□□□ -0.62
LPAP08519 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC11.2□□□□□ -0.62
LPAP08519 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC11.2□□□□□ -0.62
LPAP08519 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LPAP08519 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
LPAP08519 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LPAP08519 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LPAP08519 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LPAP08519 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC11.2□□□□□ -0.62
LPAP08519 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC11.2□□□□□ -0.62
LPAP08519 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC11.2□□□□□ -0.62
LPAP08519 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC11.2□□□□□ -0.62
LPAP08519 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC11.2□□□□□ -0.62
LPAP08519 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LPAP08519 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC11.2□□□□□ -0.62
LPAP08519 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LPAP08519 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
LPAP08519 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LPAP08519 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LPAP08519 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC11.2□□□□□ -0.62
LPAP08519 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC11.2□□□□□ -0.62
LPAP08519 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
LPAP08519 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LPAP08519 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
LPAP08519 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
LPAP08519 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LPAP08519 MESTP1-201ENST00000404287 994 ntBASIC11.19□□□□□ -0.62
LPAP08519 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC11.19□□□□□ -0.62
LPAP08519 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC11.19□□□□□ -0.62
LPAP08519 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
LPAP08519 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LPAP08519 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
LPAP08519 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LPAP08519 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC11.19□□□□□ -0.62
LPAP08519 LTBR-211ENST00000543190 785 ntTSL 3 BASIC11.19□□□□□ -0.62
LPAP08519 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
LPAP08519 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
LPAP08519 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LPAP08519 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
LPAP08519 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC11.19□□□□□ -0.62
LPAP08519 AL356652.1-201ENST00000615962 565 ntBASIC11.19□□□□□ -0.62
LPAP08519 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC11.19□□□□□ -0.62
LPAP08519 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LPAP08519 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LPAP08519 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC11.19□□□□□ -0.62
LPAP08519 LGALS8-AS1-201ENST00000487567 1457 ntBASIC11.19□□□□□ -0.62
LPAP08519 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LPAP08519 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LPAP08519 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LPAP08519 AC139887.4-201ENST00000607877 719 ntBASIC11.19□□□□□ -0.62
LPAP08519 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LPAP08519 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LPAP08519 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC11.19□□□□□ -0.62
LPAP08519 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
LPAP08519 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC11.18□□□□□ -0.62
LPAP08519 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC11.18□□□□□ -0.62
LPAP08519 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC11.18□□□□□ -0.62
LPAP08519 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LPAP08519 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LPAP08519 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LPAP08519 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LPAP08519 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LPAP08519 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LPAP08519 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
LPAP08519 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LPAP08519 GALC-202ENST00000393568 2054 ntTSL 2 BASIC11.18□□□□□ -0.62
LPAP08519 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LPAP08519 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC11.18□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms