Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTSDP07339 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTSDP07339 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CTSDP07339 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CTSDP07339 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CTSDP07339 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CTSDP07339 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC16.72■□□□□ 0.27
CTSDP07339 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC16.72■□□□□ 0.27
CTSDP07339 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CTSDP07339 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTSDP07339 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTSDP07339 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTSDP07339 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTSDP07339 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.72■□□□□ 0.27
CTSDP07339 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTSDP07339 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CTSDP07339 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CTSDP07339 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC16.71■□□□□ 0.27
CTSDP07339 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CTSDP07339 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.71■□□□□ 0.27
CTSDP07339 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CTSDP07339 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CTSDP07339 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CTSDP07339 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CTSDP07339 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CTSDP07339 UNC93B3-201ENST00000308076 687 ntBASIC16.71■□□□□ 0.27
CTSDP07339 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CTSDP07339 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CTSDP07339 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CTSDP07339 PTPA-214ENST00000423100 988 ntTSL 2 BASIC16.71■□□□□ 0.27
CTSDP07339 GRAMD4P2-201ENST00000423297 1097 ntBASIC16.71■□□□□ 0.27
CTSDP07339 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CTSDP07339 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC16.71■□□□□ 0.27
CTSDP07339 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC16.71■□□□□ 0.27
CTSDP07339 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CTSDP07339 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CTSDP07339 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.71■□□□□ 0.27
CTSDP07339 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.71■□□□□ 0.27
CTSDP07339 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CTSDP07339 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CTSDP07339 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
CTSDP07339 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
CTSDP07339 KRT8P36-201ENST00000489121 1440 ntBASIC16.7■□□□□ 0.26
CTSDP07339 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CTSDP07339 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTSDP07339 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTSDP07339 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CTSDP07339 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CTSDP07339 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.7■□□□□ 0.26
CTSDP07339 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC16.7■□□□□ 0.26
CTSDP07339 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC16.7■□□□□ 0.26
CTSDP07339 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC16.7■□□□□ 0.26
CTSDP07339 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTSDP07339 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CTSDP07339 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC16.7■□□□□ 0.26
CTSDP07339 MIR572-201ENST00000384983 95 ntBASIC16.7■□□□□ 0.26
CTSDP07339 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CTSDP07339 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC16.7■□□□□ 0.26
CTSDP07339 AC008764.7-201ENST00000593779 1081 ntBASIC16.7■□□□□ 0.26
CTSDP07339 AC120498.10-201ENST00000621827 505 ntBASIC16.7■□□□□ 0.26
CTSDP07339 CPT2-209ENST00000636935 803 ntTSL 5 BASIC16.7■□□□□ 0.26
CTSDP07339 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTSDP07339 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTSDP07339 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTSDP07339 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTSDP07339 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CTSDP07339 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTSDP07339 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CTSDP07339 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTSDP07339 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CTSDP07339 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
CTSDP07339 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CTSDP07339 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTSDP07339 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.69■□□□□ 0.26
CTSDP07339 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTSDP07339 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.69■□□□□ 0.26
CTSDP07339 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CTSDP07339 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTSDP07339 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTSDP07339 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CTSDP07339 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC16.69■□□□□ 0.26
CTSDP07339 AC024257.2-201ENST00000549699 147 ntBASIC16.69■□□□□ 0.26
CTSDP07339 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC16.69■□□□□ 0.26
CTSDP07339 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTSDP07339 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CTSDP07339 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.69■□□□□ 0.26
CTSDP07339 Z82202.1-201ENST00000623446 1880 ntBASIC16.69■□□□□ 0.26
CTSDP07339 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CTSDP07339 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTSDP07339 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CTSDP07339 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CTSDP07339 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTSDP07339 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CTSDP07339 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.68■□□□□ 0.26
CTSDP07339 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.68■□□□□ 0.26
CTSDP07339 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.68■□□□□ 0.26
CTSDP07339 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CTSDP07339 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTSDP07339 AC099791.1-201ENST00000416440 715 ntBASIC16.68■□□□□ 0.26
CTSDP07339 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms