Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.42■□□□□ 0.38
HLA-DQB1P01920 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
HLA-DQB1P01920 AL691432.2-201ENST00000607222 2038 ntBASIC17.42■□□□□ 0.38
HLA-DQB1P01920 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQB1P01920 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.42■□□□□ 0.38
HLA-DQB1P01920 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.42■□□□□ 0.38
HLA-DQB1P01920 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQB1P01920 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQB1P01920 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQB1P01920 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQB1P01920 AL356441.2-201ENST00000443009 864 ntBASIC17.42■□□□□ 0.38
HLA-DQB1P01920 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQB1P01920 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQB1P01920 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQB1P01920 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQB1P01920 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQB1P01920 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQB1P01920 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
HLA-DQB1P01920 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
HLA-DQB1P01920 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
HLA-DQB1P01920 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
HLA-DQB1P01920 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQB1P01920 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
HLA-DQB1P01920 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQB1P01920 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQB1P01920 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DQB1P01920 LINC01465-201ENST00000408887 1940 ntBASIC17.41■□□□□ 0.38
HLA-DQB1P01920 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.41■□□□□ 0.38
HLA-DQB1P01920 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DQB1P01920 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DQB1P01920 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DQB1P01920 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.41■□□□□ 0.38
HLA-DQB1P01920 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DQB1P01920 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
HLA-DQB1P01920 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.41■□□□□ 0.38
HLA-DQB1P01920 AC133561.4-201ENST00000566112 224 ntBASIC17.41■□□□□ 0.38
HLA-DQB1P01920 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
HLA-DQB1P01920 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DQB1P01920 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DQB1P01920 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
HLA-DQB1P01920 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HLA-DQB1P01920 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DQB1P01920 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DQB1P01920 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.41■□□□□ 0.38
HLA-DQB1P01920 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DQB1P01920 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DQB1P01920 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
HLA-DQB1P01920 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DQB1P01920 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DQB1P01920 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DQB1P01920 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DQB1P01920 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DQB1P01920 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DQB1P01920 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DQB1P01920 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DQB1P01920 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.4■□□□□ 0.38
HLA-DQB1P01920 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.4■□□□□ 0.38
HLA-DQB1P01920 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC17.4■□□□□ 0.38
HLA-DQB1P01920 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DQB1P01920 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DQB1P01920 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DQB1P01920 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HLA-DQB1P01920 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
HLA-DQB1P01920 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.4■□□□□ 0.38
HLA-DQB1P01920 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
HLA-DQB1P01920 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.38
HLA-DQB1P01920 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
HLA-DQB1P01920 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.39■□□□□ 0.38
HLA-DQB1P01920 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.39■□□□□ 0.38
HLA-DQB1P01920 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DQB1P01920 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DQB1P01920 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DQB1P01920 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HLA-DQB1P01920 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DQB1P01920 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.39■□□□□ 0.37
HLA-DQB1P01920 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.39■□□□□ 0.37
HLA-DQB1P01920 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
HLA-DQB1P01920 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
HLA-DQB1P01920 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DQB1P01920 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
HLA-DQB1P01920 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DQB1P01920 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.39■□□□□ 0.37
HLA-DQB1P01920 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.39■□□□□ 0.37
HLA-DQB1P01920 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.39■□□□□ 0.37
HLA-DQB1P01920 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DQB1P01920 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
HLA-DQB1P01920 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.39■□□□□ 0.37
HLA-DQB1P01920 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
HLA-DQB1P01920 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
HLA-DQB1P01920 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.39■□□□□ 0.37
HLA-DQB1P01920 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DQB1P01920 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
HLA-DQB1P01920 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.38■□□□□ 0.37
HLA-DQB1P01920 AP004607.4-201ENST00000530158 1459 ntBASIC17.38■□□□□ 0.37
HLA-DQB1P01920 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DQB1P01920 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.38■□□□□ 0.37
HLA-DQB1P01920 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HLA-DQB1P01920 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DQB1P01920 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DQB1P01920 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms