Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQA1P01909 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
HLA-DQA1P01909 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC15.17■□□□□ 0.02
HLA-DQA1P01909 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQA1P01909 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
HLA-DQA1P01909 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
HLA-DQA1P01909 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC15.16■□□□□ 0.02
HLA-DQA1P01909 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQA1P01909 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQA1P01909 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC15.16■□□□□ 0.02
HLA-DQA1P01909 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQA1P01909 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQA1P01909 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC15.16■□□□□ 0.02
HLA-DQA1P01909 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQA1P01909 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
HLA-DQA1P01909 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQA1P01909 AL138781.2-201ENST00000617896 1843 ntBASIC15.16■□□□□ 0.02
HLA-DQA1P01909 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQA1P01909 AC092028.1-203ENST00000608262 953 ntBASIC15.16■□□□□ 0.02
HLA-DQA1P01909 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC15.16■□□□□ 0.02
HLA-DQA1P01909 VGF-203ENST00000611537 1622 ntTSL 5 BASIC15.16■□□□□ 0.02
HLA-DQA1P01909 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQA1P01909 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQA1P01909 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC15.16■□□□□ 0.02
HLA-DQA1P01909 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQA1P01909 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
HLA-DQA1P01909 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQA1P01909 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQA1P01909 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC15.16■□□□□ 0.02
HLA-DQA1P01909 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
HLA-DQA1P01909 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQA1P01909 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQA1P01909 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQA1P01909 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQA1P01909 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC15.15■□□□□ 0.02
HLA-DQA1P01909 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HLA-DQA1P01909 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC15.15■□□□□ 0.02
HLA-DQA1P01909 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQA1P01909 AC009102.2-201ENST00000606772 1639 ntBASIC15.15■□□□□ 0.02
HLA-DQA1P01909 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQA1P01909 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQA1P01909 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQA1P01909 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC15.15■□□□□ 0.02
HLA-DQA1P01909 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC15.15■□□□□ 0.02
HLA-DQA1P01909 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQA1P01909 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQA1P01909 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQA1P01909 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
HLA-DQA1P01909 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQA1P01909 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQA1P01909 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQA1P01909 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQA1P01909 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQA1P01909 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC15.15■□□□□ 0.02
HLA-DQA1P01909 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQA1P01909 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQA1P01909 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC15.15■□□□□ 0.02
HLA-DQA1P01909 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQA1P01909 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC15.14■□□□□ 0.01
HLA-DQA1P01909 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
HLA-DQA1P01909 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQA1P01909 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQA1P01909 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQA1P01909 TMEM179-206ENST00000616017 1645 ntBASIC15.14■□□□□ 0.01
HLA-DQA1P01909 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQA1P01909 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQA1P01909 AC007613.1-201ENST00000572811 2597 ntBASIC15.14■□□□□ 0.01
HLA-DQA1P01909 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
HLA-DQA1P01909 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQA1P01909 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQA1P01909 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC15.14■□□□□ 0.01
HLA-DQA1P01909 RBM38-205ENST00000440234 686 ntTSL 2 BASIC15.14■□□□□ 0.01
HLA-DQA1P01909 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC15.14■□□□□ 0.01
HLA-DQA1P01909 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQA1P01909 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQA1P01909 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC15.14■□□□□ 0.01
HLA-DQA1P01909 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC15.14■□□□□ 0.01
HLA-DQA1P01909 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQA1P01909 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQA1P01909 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQA1P01909 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQA1P01909 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQA1P01909 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQA1P01909 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQA1P01909 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQA1P01909 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DQA1P01909 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DQA1P01909 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DQA1P01909 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC15.13■□□□□ 0.01
HLA-DQA1P01909 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC15.13■□□□□ 0.01
HLA-DQA1P01909 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DQA1P01909 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DQA1P01909 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC15.13■□□□□ 0.01
HLA-DQA1P01909 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DQA1P01909 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DQA1P01909 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
HLA-DQA1P01909 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DQA1P01909 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC15.13■□□□□ 0.01
HLA-DQA1P01909 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
HLA-DQA1P01909 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms