Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AC080038.3-201ENST00000623346 1952 ntBASIC23.2■■□□□ 1.3
ALDH1A1P00352 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ALDH1A1P00352 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC23.2■■□□□ 1.3
ALDH1A1P00352 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC23.2■■□□□ 1.3
ALDH1A1P00352 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ALDH1A1P00352 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ALDH1A1P00352 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
ALDH1A1P00352 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ALDH1A1P00352 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ALDH1A1P00352 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC23.2■■□□□ 1.3
ALDH1A1P00352 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC23.2■■□□□ 1.3
ALDH1A1P00352 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
ALDH1A1P00352 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC23.2■■□□□ 1.3
ALDH1A1P00352 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC23.2■■□□□ 1.3
ALDH1A1P00352 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
ALDH1A1P00352 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
ALDH1A1P00352 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ALDH1A1P00352 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC23.19■■□□□ 1.3
ALDH1A1P00352 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ALDH1A1P00352 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC23.19■■□□□ 1.3
ALDH1A1P00352 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ALDH1A1P00352 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
ALDH1A1P00352 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ALDH1A1P00352 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ALDH1A1P00352 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC23.19■■□□□ 1.3
ALDH1A1P00352 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC23.19■■□□□ 1.3
ALDH1A1P00352 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC23.19■■□□□ 1.3
ALDH1A1P00352 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC23.19■■□□□ 1.3
ALDH1A1P00352 AL121894.2-201ENST00000602977 491 ntBASIC23.19■■□□□ 1.3
ALDH1A1P00352 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ALDH1A1P00352 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ALDH1A1P00352 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC23.19■■□□□ 1.3
ALDH1A1P00352 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ALDH1A1P00352 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
ALDH1A1P00352 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC23.18■■□□□ 1.3
ALDH1A1P00352 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ALDH1A1P00352 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.18■■□□□ 1.3
ALDH1A1P00352 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ALDH1A1P00352 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ALDH1A1P00352 FAM8A6P-201ENST00000407496 1135 ntBASIC23.18■■□□□ 1.3
ALDH1A1P00352 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ALDH1A1P00352 DBP-204ENST00000599385 709 ntTSL 3 BASIC23.18■■□□□ 1.3
ALDH1A1P00352 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ALDH1A1P00352 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ALDH1A1P00352 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ALDH1A1P00352 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ALDH1A1P00352 KRT18P48-201ENST00000434763 852 ntBASIC23.17■■□□□ 1.3
ALDH1A1P00352 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ALDH1A1P00352 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC23.17■■□□□ 1.3
ALDH1A1P00352 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
ALDH1A1P00352 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC23.17■■□□□ 1.3
ALDH1A1P00352 MYC-208ENST00000641036 567 ntBASIC23.17■■□□□ 1.3
ALDH1A1P00352 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ALDH1A1P00352 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.17■■□□□ 1.3
ALDH1A1P00352 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC23.16■■□□□ 1.3
ALDH1A1P00352 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ALDH1A1P00352 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ALDH1A1P00352 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC23.16■■□□□ 1.3
ALDH1A1P00352 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC23.16■■□□□ 1.3
ALDH1A1P00352 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ALDH1A1P00352 SAPCD2P2-201ENST00000431719 1174 ntBASIC23.16■■□□□ 1.3
ALDH1A1P00352 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC23.16■■□□□ 1.3
ALDH1A1P00352 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC23.16■■□□□ 1.3
ALDH1A1P00352 CLN6-204ENST00000564752 900 ntTSL 3 BASIC23.16■■□□□ 1.3
ALDH1A1P00352 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
ALDH1A1P00352 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.16■■□□□ 1.3
ALDH1A1P00352 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
ALDH1A1P00352 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
ALDH1A1P00352 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
ALDH1A1P00352 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
ALDH1A1P00352 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ALDH1A1P00352 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ALDH1A1P00352 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
ALDH1A1P00352 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
ALDH1A1P00352 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ALDH1A1P00352 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ALDH1A1P00352 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
ALDH1A1P00352 AC009947.2-201ENST00000444014 672 ntBASIC23.15■■□□□ 1.3
ALDH1A1P00352 AP000550.4-202ENST00000639755 178 ntBASIC23.15■■□□□ 1.3
ALDH1A1P00352 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ALDH1A1P00352 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.15■■□□□ 1.3
ALDH1A1P00352 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
ALDH1A1P00352 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ALDH1A1P00352 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
ALDH1A1P00352 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC23.14■■□□□ 1.29
ALDH1A1P00352 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC23.14■■□□□ 1.29
ALDH1A1P00352 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.29
ALDH1A1P00352 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
ALDH1A1P00352 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
ALDH1A1P00352 MESTP1-201ENST00000404287 994 ntBASIC23.14■■□□□ 1.29
ALDH1A1P00352 AL031133.1-201ENST00000406807 723 ntBASIC23.14■■□□□ 1.29
ALDH1A1P00352 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC23.14■■□□□ 1.29
ALDH1A1P00352 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC23.14■■□□□ 1.29
ALDH1A1P00352 PPP1R14BP5-201ENST00000440334 435 ntBASIC23.14■■□□□ 1.29
ALDH1A1P00352 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC23.14■■□□□ 1.29
ALDH1A1P00352 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC23.14■■□□□ 1.29
ALDH1A1P00352 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
ALDH1A1P00352 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC23.14■■□□□ 1.29
ALDH1A1P00352 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
ALDH1A1P00352 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms