Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SNX4O95219 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNX4O95219 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNX4O95219 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNX4O95219 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SNX4O95219 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.87■□□□□ 0.61
SNX4O95219 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.87■□□□□ 0.61
SNX4O95219 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.87■□□□□ 0.61
SNX4O95219 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX4O95219 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX4O95219 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX4O95219 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
SNX4O95219 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX4O95219 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.86■□□□□ 0.61
SNX4O95219 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
SNX4O95219 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX4O95219 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX4O95219 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.86■□□□□ 0.61
SNX4O95219 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SNX4O95219 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX4O95219 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SNX4O95219 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX4O95219 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX4O95219 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SNX4O95219 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.86■□□□□ 0.61
SNX4O95219 GUSBP6-202ENST00000438529 1198 ntBASIC18.86■□□□□ 0.61
SNX4O95219 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.86■□□□□ 0.61
SNX4O95219 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.86■□□□□ 0.61
SNX4O95219 AC142086.2-201ENST00000569753 217 ntBASIC18.86■□□□□ 0.61
SNX4O95219 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.86■□□□□ 0.61
SNX4O95219 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.86■□□□□ 0.61
SNX4O95219 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX4O95219 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SNX4O95219 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SNX4O95219 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX4O95219 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX4O95219 GABARAPL3-202ENST00000624044 1851 ntBASIC18.86■□□□□ 0.61
SNX4O95219 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX4O95219 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNX4O95219 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
SNX4O95219 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
SNX4O95219 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNX4O95219 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
SNX4O95219 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNX4O95219 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.85■□□□□ 0.61
SNX4O95219 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNX4O95219 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNX4O95219 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.85■□□□□ 0.61
SNX4O95219 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNX4O95219 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNX4O95219 AL355802.2-201ENST00000402069 882 ntBASIC18.85■□□□□ 0.61
SNX4O95219 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.85■□□□□ 0.61
SNX4O95219 AC093787.1-201ENST00000450396 207 ntBASIC18.85■□□□□ 0.61
SNX4O95219 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.85■□□□□ 0.61
SNX4O95219 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNX4O95219 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.85■□□□□ 0.61
SNX4O95219 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.85■□□□□ 0.61
SNX4O95219 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNX4O95219 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SNX4O95219 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SNX4O95219 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNX4O95219 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNX4O95219 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNX4O95219 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.85■□□□□ 0.61
SNX4O95219 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SNX4O95219 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SNX4O95219 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNX4O95219 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNX4O95219 AC010980.2-201ENST00000587099 1412 ntBASIC18.84■□□□□ 0.61
SNX4O95219 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX4O95219 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX4O95219 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SNX4O95219 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.84■□□□□ 0.61
SNX4O95219 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX4O95219 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX4O95219 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SNX4O95219 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SNX4O95219 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.84■□□□□ 0.61
SNX4O95219 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.84■□□□□ 0.61
SNX4O95219 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.84■□□□□ 0.61
SNX4O95219 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.84■□□□□ 0.61
SNX4O95219 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SNX4O95219 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX4O95219 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX4O95219 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX4O95219 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SNX4O95219 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX4O95219 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SNX4O95219 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.84■□□□□ 0.61
SNX4O95219 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX4O95219 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.84■□□□□ 0.61
SNX4O95219 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.83■□□□□ 0.61
SNX4O95219 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SNX4O95219 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SNX4O95219 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.83■□□□□ 0.61
SNX4O95219 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SNX4O95219 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SNX4O95219 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.83■□□□□ 0.6
SNX4O95219 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.83■□□□□ 0.6
SNX4O95219 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms