Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDRT1O95170 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDRT1O95170 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDRT1O95170 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CDRT1O95170 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDRT1O95170 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CDRT1O95170 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.95■□□□□ 0.46
CDRT1O95170 AC024257.2-201ENST00000549699 147 ntBASIC17.95■□□□□ 0.46
CDRT1O95170 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDRT1O95170 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDRT1O95170 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.95■□□□□ 0.46
CDRT1O95170 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDRT1O95170 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDRT1O95170 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDRT1O95170 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CDRT1O95170 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDRT1O95170 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDRT1O95170 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDRT1O95170 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDRT1O95170 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CDRT1O95170 NEFHP1-201ENST00000412845 2629 ntBASIC17.94■□□□□ 0.46
CDRT1O95170 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.94■□□□□ 0.46
CDRT1O95170 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CDRT1O95170 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
CDRT1O95170 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CDRT1O95170 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDRT1O95170 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDRT1O95170 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDRT1O95170 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDRT1O95170 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.94■□□□□ 0.46
CDRT1O95170 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.94■□□□□ 0.46
CDRT1O95170 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDRT1O95170 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.94■□□□□ 0.46
CDRT1O95170 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CDRT1O95170 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDRT1O95170 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDRT1O95170 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDRT1O95170 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.94■□□□□ 0.46
CDRT1O95170 AC093484.2-201ENST00000580996 2166 ntBASIC17.94■□□□□ 0.46
CDRT1O95170 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDRT1O95170 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDRT1O95170 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDRT1O95170 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.94■□□□□ 0.46
CDRT1O95170 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDRT1O95170 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDRT1O95170 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDRT1O95170 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
CDRT1O95170 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.93■□□□□ 0.46
CDRT1O95170 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.93■□□□□ 0.46
CDRT1O95170 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CDRT1O95170 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.93■□□□□ 0.46
CDRT1O95170 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.93■□□□□ 0.46
CDRT1O95170 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CDRT1O95170 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDRT1O95170 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.93■□□□□ 0.46
CDRT1O95170 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDRT1O95170 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDRT1O95170 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDRT1O95170 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
CDRT1O95170 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDRT1O95170 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CDRT1O95170 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDRT1O95170 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CDRT1O95170 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.93■□□□□ 0.46
CDRT1O95170 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDRT1O95170 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.93■□□□□ 0.46
CDRT1O95170 AL136162.1-201ENST00000607711 1078 ntBASIC17.93■□□□□ 0.46
CDRT1O95170 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDRT1O95170 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDRT1O95170 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CDRT1O95170 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.93■□□□□ 0.46
CDRT1O95170 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.93■□□□□ 0.46
CDRT1O95170 AC020763.4-201ENST00000623414 4170 ntBASIC17.93■□□□□ 0.46
CDRT1O95170 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
CDRT1O95170 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDRT1O95170 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDRT1O95170 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDRT1O95170 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.92■□□□□ 0.46
CDRT1O95170 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDRT1O95170 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.92■□□□□ 0.46
CDRT1O95170 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDRT1O95170 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDRT1O95170 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CDRT1O95170 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CDRT1O95170 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDRT1O95170 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CDRT1O95170 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.92■□□□□ 0.46
CDRT1O95170 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDRT1O95170 IGHV3-19-201ENST00000521488 291 ntBASIC17.92■□□□□ 0.46
CDRT1O95170 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.92■□□□□ 0.46
CDRT1O95170 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDRT1O95170 AC093503.3-201ENST00000624917 2352 ntBASIC17.92■□□□□ 0.46
CDRT1O95170 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CDRT1O95170 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
CDRT1O95170 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.92■□□□□ 0.46
CDRT1O95170 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDRT1O95170 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDRT1O95170 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CDRT1O95170 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDRT1O95170 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms