Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC9.09□□□□□ -0.95
USH2AO75445 EMBP1-201ENST00000458200 901 ntBASIC9.09□□□□□ -0.95
USH2AO75445 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
USH2AO75445 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC9.09□□□□□ -0.95
USH2AO75445 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC9.09□□□□□ -0.95
USH2AO75445 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC9.09□□□□□ -0.95
USH2AO75445 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
USH2AO75445 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
USH2AO75445 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
USH2AO75445 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
USH2AO75445 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
USH2AO75445 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
USH2AO75445 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC9.08□□□□□ -0.96
USH2AO75445 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
USH2AO75445 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC9.08□□□□□ -0.96
USH2AO75445 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC9.08□□□□□ -0.96
USH2AO75445 BCL10-202ENST00000620248 774 ntTSL 5 BASIC9.08□□□□□ -0.96
USH2AO75445 AL031985.4-201ENST00000642138 673 ntBASIC9.08□□□□□ -0.96
USH2AO75445 LINC01124-201ENST00000409786 2117 ntBASIC9.08□□□□□ -0.96
USH2AO75445 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
USH2AO75445 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC9.08□□□□□ -0.96
USH2AO75445 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC9.08□□□□□ -0.96
USH2AO75445 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
USH2AO75445 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
USH2AO75445 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
USH2AO75445 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC9.08□□□□□ -0.96
USH2AO75445 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC9.08□□□□□ -0.96
USH2AO75445 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC9.08□□□□□ -0.96
USH2AO75445 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC9.08□□□□□ -0.96
USH2AO75445 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC9.08□□□□□ -0.96
USH2AO75445 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
USH2AO75445 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
USH2AO75445 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
USH2AO75445 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
USH2AO75445 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
USH2AO75445 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC9.08□□□□□ -0.96
USH2AO75445 PRR29-207ENST00000580752 458 ntTSL 3 BASIC9.08□□□□□ -0.96
USH2AO75445 AC012313.10-201ENST00000623509 926 ntBASIC9.08□□□□□ -0.96
USH2AO75445 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
USH2AO75445 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC9.08□□□□□ -0.96
USH2AO75445 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
USH2AO75445 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
USH2AO75445 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.96
USH2AO75445 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
USH2AO75445 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
USH2AO75445 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC9.08□□□□□ -0.96
USH2AO75445 AP002982.1-201ENST00000492365 877 ntBASIC9.08□□□□□ -0.96
USH2AO75445 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
USH2AO75445 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC9.08□□□□□ -0.96
USH2AO75445 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
USH2AO75445 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
USH2AO75445 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
USH2AO75445 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC9.08□□□□□ -0.96
USH2AO75445 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC9.07□□□□□ -0.96
USH2AO75445 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
USH2AO75445 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC9.07□□□□□ -0.96
USH2AO75445 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC9.07□□□□□ -0.96
USH2AO75445 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC9.07□□□□□ -0.96
USH2AO75445 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC9.07□□□□□ -0.96
USH2AO75445 AC092647.4-201ENST00000457211 535 ntBASIC9.07□□□□□ -0.96
USH2AO75445 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC9.07□□□□□ -0.96
USH2AO75445 B3GAT3P1-201ENST00000471720 806 ntBASIC9.07□□□□□ -0.96
USH2AO75445 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
USH2AO75445 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
USH2AO75445 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
USH2AO75445 COMT-203ENST00000403184 2217 ntTSL 2 BASIC9.07□□□□□ -0.96
USH2AO75445 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC9.07□□□□□ -0.96
USH2AO75445 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
USH2AO75445 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
USH2AO75445 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC9.07□□□□□ -0.96
USH2AO75445 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
USH2AO75445 KRT18P13-201ENST00000400056 1290 ntBASIC9.07□□□□□ -0.96
USH2AO75445 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
USH2AO75445 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC9.07□□□□□ -0.96
USH2AO75445 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
USH2AO75445 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
USH2AO75445 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
USH2AO75445 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
USH2AO75445 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
USH2AO75445 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
USH2AO75445 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
USH2AO75445 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
USH2AO75445 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
USH2AO75445 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
USH2AO75445 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
USH2AO75445 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
USH2AO75445 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC9.07□□□□□ -0.96
USH2AO75445 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC9.07□□□□□ -0.96
USH2AO75445 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
USH2AO75445 CFL1-212ENST00000531413 636 ntTSL 3 BASIC9.07□□□□□ -0.96
USH2AO75445 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
USH2AO75445 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
USH2AO75445 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
USH2AO75445 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC9.07□□□□□ -0.96
USH2AO75445 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
USH2AO75445 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
USH2AO75445 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
USH2AO75445 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
USH2AO75445 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
USH2AO75445 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms