Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.18■■□□□ 1.3
ATP2A1O14983 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATP2A1O14983 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
ATP2A1O14983 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC23.17■■□□□ 1.3
ATP2A1O14983 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP2A1O14983 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
ATP2A1O14983 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ATP2A1O14983 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC23.17■■□□□ 1.3
ATP2A1O14983 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC23.17■■□□□ 1.3
ATP2A1O14983 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ATP2A1O14983 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP2A1O14983 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ATP2A1O14983 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ATP2A1O14983 REXO2-216ENST00000544196 452 ntTSL 3 BASIC23.17■■□□□ 1.3
ATP2A1O14983 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC23.17■■□□□ 1.3
ATP2A1O14983 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
ATP2A1O14983 AP001412.1-201ENST00000608405 714 ntBASIC23.17■■□□□ 1.3
ATP2A1O14983 AL049637.2-201ENST00000641778 930 ntBASIC23.17■■□□□ 1.3
ATP2A1O14983 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ATP2A1O14983 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC23.17■■□□□ 1.3
ATP2A1O14983 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP2A1O14983 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP2A1O14983 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP2A1O14983 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ATP2A1O14983 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATP2A1O14983 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATP2A1O14983 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ATP2A1O14983 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ATP2A1O14983 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
ATP2A1O14983 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ATP2A1O14983 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC23.16■■□□□ 1.3
ATP2A1O14983 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ATP2A1O14983 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC23.16■■□□□ 1.3
ATP2A1O14983 PRKY-204ENST00000533551 1019 ntBASIC23.16■■□□□ 1.3
ATP2A1O14983 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
ATP2A1O14983 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATP2A1O14983 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC23.16■■□□□ 1.3
ATP2A1O14983 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATP2A1O14983 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
ATP2A1O14983 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
ATP2A1O14983 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC23.15■■□□□ 1.3
ATP2A1O14983 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
ATP2A1O14983 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ATP2A1O14983 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
ATP2A1O14983 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
ATP2A1O14983 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ATP2A1O14983 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC23.15■■□□□ 1.3
ATP2A1O14983 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ATP2A1O14983 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC23.15■■□□□ 1.3
ATP2A1O14983 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC23.15■■□□□ 1.3
ATP2A1O14983 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
ATP2A1O14983 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ATP2A1O14983 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
ATP2A1O14983 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC23.15■■□□□ 1.3
ATP2A1O14983 AC073912.3-201ENST00000624414 853 ntBASIC23.15■■□□□ 1.3
ATP2A1O14983 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
ATP2A1O14983 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC23.15■■□□□ 1.3
ATP2A1O14983 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
ATP2A1O14983 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC23.15■■□□□ 1.3
ATP2A1O14983 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ATP2A1O14983 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
ATP2A1O14983 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ATP2A1O14983 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
ATP2A1O14983 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC23.14■■□□□ 1.3
ATP2A1O14983 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.3
ATP2A1O14983 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC23.14■■□□□ 1.29
ATP2A1O14983 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC23.14■■□□□ 1.29
ATP2A1O14983 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ATP2A1O14983 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ATP2A1O14983 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC23.14■■□□□ 1.29
ATP2A1O14983 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC23.14■■□□□ 1.29
ATP2A1O14983 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC23.14■■□□□ 1.29
ATP2A1O14983 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC23.14■■□□□ 1.29
ATP2A1O14983 CABP2-204ENST00000636477 941 ntTSL 5 BASIC23.14■■□□□ 1.29
ATP2A1O14983 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ATP2A1O14983 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC23.14■■□□□ 1.29
ATP2A1O14983 PTBP1P-201ENST00000554374 1601 ntBASIC23.14■■□□□ 1.29
ATP2A1O14983 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
ATP2A1O14983 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ATP2A1O14983 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ATP2A1O14983 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
ATP2A1O14983 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC23.13■■□□□ 1.29
ATP2A1O14983 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ATP2A1O14983 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
ATP2A1O14983 GXYLT1P3-201ENST00000453058 1193 ntBASIC23.13■■□□□ 1.29
ATP2A1O14983 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC23.13■■□□□ 1.29
ATP2A1O14983 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC23.13■■□□□ 1.29
ATP2A1O14983 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ATP2A1O14983 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
ATP2A1O14983 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ATP2A1O14983 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.13■■□□□ 1.29
ATP2A1O14983 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ATP2A1O14983 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
ATP2A1O14983 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ATP2A1O14983 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
ATP2A1O14983 FEM1AP4-201ENST00000443167 1987 ntBASIC23.12■■□□□ 1.29
ATP2A1O14983 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ATP2A1O14983 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ATP2A1O14983 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ATP2A1O14983 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms