Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 AC241377.3-202ENST00000626088 1088 ntBASIC19.17■□□□□ 0.66
CASQ2O14958 AC241585.3-202ENST00000628937 1088 ntBASIC19.17■□□□□ 0.66
CASQ2O14958 AC245100.8-202ENST00000629247 1058 ntBASIC19.17■□□□□ 0.66
CASQ2O14958 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.17■□□□□ 0.66
CASQ2O14958 AC120498.9-201ENST00000339021 3867 ntBASIC19.17■□□□□ 0.66
CASQ2O14958 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
CASQ2O14958 TMEM179-206ENST00000616017 1645 ntBASIC19.17■□□□□ 0.66
CASQ2O14958 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CASQ2O14958 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CASQ2O14958 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CASQ2O14958 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.17■□□□□ 0.66
CASQ2O14958 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CASQ2O14958 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.16■□□□□ 0.66
CASQ2O14958 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASQ2O14958 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.16■□□□□ 0.66
CASQ2O14958 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.16■□□□□ 0.66
CASQ2O14958 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASQ2O14958 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
CASQ2O14958 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CASQ2O14958 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASQ2O14958 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASQ2O14958 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CASQ2O14958 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASQ2O14958 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASQ2O14958 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASQ2O14958 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASQ2O14958 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASQ2O14958 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CASQ2O14958 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.16■□□□□ 0.66
CASQ2O14958 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CASQ2O14958 AC010980.1-201ENST00000587192 1142 ntBASIC19.16■□□□□ 0.66
CASQ2O14958 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.16■□□□□ 0.66
CASQ2O14958 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CASQ2O14958 TREX1-205ENST00000625293 1783 ntBASIC19.16■□□□□ 0.66
CASQ2O14958 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASQ2O14958 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CASQ2O14958 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
CASQ2O14958 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
CASQ2O14958 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.15■□□□□ 0.66
CASQ2O14958 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.15■□□□□ 0.66
CASQ2O14958 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CASQ2O14958 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CASQ2O14958 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.15■□□□□ 0.66
CASQ2O14958 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.15■□□□□ 0.66
CASQ2O14958 pRNA.6-201ENST00000610482 90 ntBASIC19.15■□□□□ 0.66
CASQ2O14958 pRNA.5-201ENST00000612139 90 ntBASIC19.15■□□□□ 0.66
CASQ2O14958 pRNA.11-201ENST00000618423 90 ntBASIC19.15■□□□□ 0.66
CASQ2O14958 pRNA.13-201ENST00000619112 90 ntBASIC19.15■□□□□ 0.66
CASQ2O14958 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CASQ2O14958 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CASQ2O14958 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.15■□□□□ 0.66
CASQ2O14958 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CASQ2O14958 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CASQ2O14958 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CASQ2O14958 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CASQ2O14958 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
CASQ2O14958 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CASQ2O14958 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CASQ2O14958 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.14■□□□□ 0.65
CASQ2O14958 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CASQ2O14958 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.14■□□□□ 0.65
CASQ2O14958 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.14■□□□□ 0.65
CASQ2O14958 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CASQ2O14958 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CASQ2O14958 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CASQ2O14958 AL138781.2-201ENST00000617896 1843 ntBASIC19.14■□□□□ 0.65
CASQ2O14958 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CASQ2O14958 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.13■□□□□ 0.65
CASQ2O14958 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.13■□□□□ 0.65
CASQ2O14958 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CASQ2O14958 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.13■□□□□ 0.65
CASQ2O14958 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.13■□□□□ 0.65
CASQ2O14958 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CASQ2O14958 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CASQ2O14958 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CASQ2O14958 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CASQ2O14958 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.13■□□□□ 0.65
CASQ2O14958 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.13■□□□□ 0.65
CASQ2O14958 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
CASQ2O14958 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CASQ2O14958 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CASQ2O14958 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CASQ2O14958 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CASQ2O14958 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CASQ2O14958 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CASQ2O14958 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CASQ2O14958 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.12■□□□□ 0.65
CASQ2O14958 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CASQ2O14958 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CASQ2O14958 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.12■□□□□ 0.65
CASQ2O14958 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CASQ2O14958 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CASQ2O14958 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CASQ2O14958 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CASQ2O14958 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CASQ2O14958 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.12■□□□□ 0.65
CASQ2O14958 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CASQ2O14958 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CASQ2O14958 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CASQ2O14958 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms